C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: succinate-CoA ligase, GDP-forming, alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064740 Suclg1-001 ENSMUSG00000052738 10090 + 6:73248382-73276911 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064740
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064740 61.642±11.70 27.391±5.49 58.402±18.51 25.665±7.88 47.688±17.03 80.145±6.09 119.156±31.12 134.057±13.02 75.815±19.58 34.067±3.13 92.062±14.55 20.298±4.06 59.895±54.83 56.702±25.63

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003878 IEA ATP citrate synthase activity
GO:0004775 IEA succinate-CoA ligase (ADP-forming) activity
GO:0004776 IEA succinate-CoA ligase (GDP-forming) activity
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006099 IEA tricarboxylic acid cycle
GO:0006104 IEA succinyl-CoA metabolic process
GO:0006105 IEA succinate metabolic process
GO:0019003 IEA GDP binding
GO:0043234 IEA protein complex
GO:0044822 IEA poly(A) RNA binding
GO:0045244 IEA succinate-CoA ligase complex (GDP-forming)
GO:0046982 IEA protein heterodimerization activity
GO:0048037 IEA cofactor binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393868 SUCLG1-001 protein_coding Homo_sapiens 0 1205
ENST00000430989 SUCLG1-006 processed_transcript Homo_sapiens 0 226
ENST00000442240 SUCLG1-005 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000483605 SUCLG1-004 processed_transcript Homo_sapiens 0 536
ENST00000484365 SUCLG1-002 retained_intron Homo_sapiens 0 292
ENST00000487809 SUCLG1-009 retained_intron Homo_sapiens 0 492
ENST00000488234 SUCLG1-007 processed_transcript Homo_sapiens 2e-34 148
ENST00000491123 SUCLG1-008 processed_transcript Homo_sapiens 0 446
ENST00000491642 SUCLG1-003 processed_transcript Homo_sapiens 0 475

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