C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribose 5-phosphate isomerase A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053604 Rpia 10090 - 6:70765720-70792232 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066134 Rpia-001 70765720-70792232 protein_coding
  ENSMUST00000124633 Rpia-003 70766273-70773692 processed_transcript
  ENSMUST00000129244 Rpia-002 70782080-70792003 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066134ENSMUST00000124633ENSMUST00000129244
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066134 12.727±1.86 6.035±2.83 13.605±2.64 5.196±2.53 8.433±0.95 7.812±1.30 4.057±0.56 8.204±1.30 17.187±17.67 7.483±0.59 7.114±1.18 9.415±2.32 25.751±13.18 5.607±0.67
ENSMUST00000124633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.994±0.00 19.640±3.77 N/A
ENSMUST00000129244 0.826±0.00 N/A N/A 0.583±0.00 0.693±0.00 N/A N/A N/A 0.275±0.14 0.523±0.00 0.452±0.04 1.373±0.00 N/A 0.711±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QR CIL_0004QR_0002 CGP 6:70765720-70905245

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004751 IDA ribose-5-phosphate isomerase activity
GO:0006098 IEA pentose-phosphate shunt
GO:0019693 IEA ribose phosphate metabolic process
GO:0030246 IEA carbohydrate binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0048029 IEA monosaccharide binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056640 rpia ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) protein_coding Danio_rerio
ENSG00000153574 RPIA ribose 5-phosphate isomerase A protein_coding Homo_sapiens

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