C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: differentiation antagonizing non-protein coding RNA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053656 Dancr 10090 + 5:74093060-74095405 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066220 Dancr-201 74093060-74095405 processed_transcript
  ENSMUST00000117249 Dancr-002 74093083-74094336 retained_intron
  ENSMUST00000120364 Dancr-001 74093077-74094337 lincRNA
  ENSMUST00000132389 Dancr-003 74093060-74094336 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066220ENSMUST00000117249ENSMUST00000120364ENSMUST00000132389
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.01 N/A N/A N/A
ENSMUST00000117249 N/A N/A N/A 0.682±0.00 N/A N/A N/A N/A N/A N/A 0.113±0.02 1.622±0.55 1.898±1.36 N/A
ENSMUST00000120364 4.542±2.70 N/A 22.635±8.33 15.153±11.72 3.820±1.22 3.296±0.73 3.021±1.08 4.680±0.84 13.269±13.52 3.350±0.50 0.955±0.27 7.456±2.63 6.208±2.81 3.441±0.44
ENSMUST00000132389 2.094±0.19 3.557±1.08 7.015±0.00 2.508±1.23 3.698±1.21 5.069±0.86 0.784±0.29 1.265±0.54 2.642±2.30 2.228±0.86 0.118±0.00 8.646±3.51 1.146±0.47 0.468±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082M CIL_00082M_0002 VISTA 5:73965657-74568205
CIL_0008RT CIL_0008RT_0002 VISTA 5:74061294-74663523

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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