Institute of Cardiovascular Regeneration Webtool Repository

Region Summary

Source ID	Type	Tax ID	Position
hs1668	VISTA	9606	4:52776116-53378130
Gene	Transcript	Position	Biotype
ENSG00000128045 (RASL11B) RAS-like, family 11, member B	ENST00000248706 (RASL11B-001)	52862290-52866835	protein_coding
	ENST00000505041 (RASL11B-002)	52864146-52866799	processed_transcript
	ENST00000515677 (RASL11B-003)	52862332-52863610	retained_intron
ENSG00000145216 (FIP1L1) factor interacting with PAPOLA and CPSF1	ENST00000306932 (FIP1L1-003)	53377696-53459621	protein_coding
	ENST00000337488 (FIP1L1-001)	53377645-53459668	protein_coding
	ENST00000358575 (FIP1L1-002)	53377645-53459668	protein_coding
	ENST00000504094 (FIP1L1-010)	53428066-53460861	protein_coding
	ENST00000505125 (FIP1L1-004)	53377803-53459621	retained_intron
	ENST00000507166 (FIP1L1-005)	53377839-54295272	protein_coding
	ENST00000507206 (FIP1L1-013)	53458551-53459402	retained_intron
	ENST00000507922 (FIP1L1-009)	53377671-53428221	protein_coding
	ENST00000510668 (FIP1L1-015)	53378218-53389849	processed_transcript
	ENST00000511055 (FIP1L1-014)	53442253-53453131	retained_intron
	ENST00000511376 (FIP1L1-012)	53377643-53390597	processed_transcript
	ENST00000513008 (FIP1L1-008)	53425836-53459621	retained_intron
	ENST00000513975 (FIP1L1-006)	53377843-53440983	retained_intron
	ENST00000514543 (FIP1L1-011)	53382278-53459618	nonsense_mediated_decay
ENSG00000184178 (SCFD2) sec1 family domain containing 2	ENST00000388940 (SCFD2-002)	52873788-53366061	protein_coding
	ENST00000401642 (SCFD2-001)	52872982-53366075	protein_coding
	ENST00000503450 (SCFD2-003)	53352598-53366066	protein_coding
	ENST00000611795 (SCFD2-201)	53273579-53365941	protein_coding
ENSG00000199901 (Y_RNA) Y RNA	ENST00000363031 (Y_RNA.1-289)	52786537-52786638	misc_RNA
ENSG00000248115 (RP11-752D24.2)	ENST00000504048 (RP11-752D24.2-003)	52945666-52948752	antisense
	ENST00000508813 (RP11-752D24.2-002)	52945689-52958087	antisense
	ENST00000510351 (RP11-752D24.2-001)	52945649-52951022	antisense
ENSG00000250302 (RP11-752D24.3)	ENST00000514957 (RP11-752D24.3-001)	52789994-52815464	lincRNA

CIL_0008RT_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
hs1668	VISTA	10090	5:74061294-74663523
Gene	Transcript	Position	Biotype
ENSMUSG00000029227 (Fip1l1) FIP1 like 1 (S. cerevisiae)	ENSMUST00000080164 (Fip1l1-001)	74535449-74598790	protein_coding
	ENSMUST00000113534 (Fip1l1-007)	74535524-74592430	protein_coding
	ENSMUST00000113535 (Fip1l1-004)	74535497-74596145	protein_coding
	ENSMUST00000113536 (Fip1l1-003)	74535482-74596148	protein_coding
	ENSMUST00000120618 (Fip1l1-005)	74535493-74596206	protein_coding
	ENSMUST00000121950 (Fip1l1-008)	74535548-74596206	protein_coding
	ENSMUST00000122245 (Fip1l1-006)	74535485-74596119	protein_coding
	ENSMUST00000125129 (Fip1l1-011)	74594743-74595916	retained_intron
	ENSMUST00000135377 (Fip1l1-010)	74535485-74540566	retained_intron
	ENSMUST00000139697 (Fip1l1-009)	74586803-74591990	retained_intron
ENSMUSG00000049907 (Rasl11b) RAS-like, family 11, member B	ENSMUST00000051937 (Rasl11b-001)	74195288-74199481	protein_coding
ENSMUSG00000049907 (Rasl11b) RAS-like, family 11, member B	ENSMUST00000183995 (Rasl11b-002)	74195445-74196290	retained_intron
ENSMUSG00000053656 (Dancr) differentiation antagonizing non-protein coding RNA	ENSMUST00000066220 (Dancr-201)	74093060-74095405	processed_transcript
	ENSMUST00000117249 (Dancr-002)	74093083-74094336	retained_intron
	ENSMUST00000120364 (Dancr-001)	74093077-74094337	lincRNA
	ENSMUST00000132389 (Dancr-003)	74093060-74094336	retained_intron
ENSMUSG00000054814 (Usp46) ubiquitin specific peptidase 46	ENSMUST00000068058 (Usp46-001)	73998646-74068430	protein_coding
	ENSMUST00000119154 (Usp46-002)	73998463-74068420	protein_coding
	ENSMUST00000128750 (Usp46-003)	74001799-74035641	processed_transcript
	ENSMUST00000145016 (Usp46-004)	74029316-74065744	protein_coding
	ENSMUST00000150009 (Usp46-005)	74029270-74032591	retained_intron
	ENSMUST00000152408 (Usp46-006)	74028586-74029366	processed_transcript
ENSMUSG00000062110 (Scfd2) Sec1 family domain containing 2	ENSMUST00000072857 (Scfd2-001)	74204816-74531742	protein_coding
	ENSMUST00000075848 (Scfd2-005)	74447780-74531747	nonsense_mediated_decay
	ENSMUST00000113542 (Scfd2-002)	74206093-74531619	protein_coding
	ENSMUST00000121330 (Scfd2-003)	74206128-74531742	protein_coding
	ENSMUST00000123203 (Scfd2-006)	74515163-74531742	processed_transcript
	ENSMUST00000142216 (Scfd2-007)	74458373-74479126	processed_transcript
	ENSMUST00000146015 (Scfd2-009)	74206089-74225484	retained_intron
	ENSMUST00000148994 (Scfd2-008)	74395135-74397738	processed_transcript
	ENSMUST00000151474 (Scfd2-004)	74456260-74531747	protein_coding
ENSMUSG00000080700 (Gm15981) predicted gene 15981	ENSMUST00000119196 (Gm15981-001)	74316566-74317029	processed_pseudogene
ENSMUSG00000084132 (Gm15982) predicted gene 15982	ENSMUST00000121681 (Gm15982-001)	74356566-74358415	processed_pseudogene
ENSMUSG00000093355 (Snora26) small nucleolar RNA, H/ACA box 26	ENSMUST00000175614 (Snora26-201)	74093530-74093650	snoRNA

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000128045

ENST00000248706

0.411±0.00

2.392±0.00

0.784±0.00

5.378±2.31

0.130±0.00

0.666±0.00

1.425±0.00

11.832±0.00

0.168±0.00

0.249±0.15

0.208±0.09

6.899±5.14

10.468±0.20

7.036±3.87

ENST00000505041

N/A

0.666±0.00

N/A

0.142±0.10

0.055±0.00

0.036±0.00

0.070±0.00

0.390±0.00

N/A

0.364±0.00

N/A

ENST00000515677

N/A

ENSG00000145216

ENST00000306932

N/A

15.805±0.00

12.019±0.00

ENST00000337488

N/A

20.547±0.00

ENST00000358575

N/A

5.688±0.00

N/A

4.019±0.00

N/A

N/A

N/A

N/A

N/A

N/A

9.973±0.00

N/A

29.238±0.00

N/A

N/A

N/A

N/A

N/A

N/A

ENSG00000184178

ENST00000388940

2.897±0.00

3.030±0.00

N/A

2.612±0.95

3.079±0.00

1.529±0.54

0.714±0.51

2.255±0.00

1.412±0.14

1.594±0.56

1.345±0.31

1.621±0.52

2.489±0.18

1.169±0.59

ENST00000401642

0.609±0.00

N/A

1.024±0.00

2.655±0.00

0.968±0.00

0.366±0.00

1.628±0.00

1.035±0.00

0.782±0.00

N/A

3.093±0.40

2.486±0.93

0.977±0.00

ENST00000503450

N/A

2.147±0.00

N/A

ENST00000611795

N/A

1.027±0.00

0.720±0.00

N/A

3.022±0.00

1.279±0.00

2.494±0.00

1.696±0.00

1.236±0.00

2.199±0.00

2.495±0.00

N/A

1.049±0.00

ENSG00000199901

ENST00000363031

N/A

1.254±0.00

N/A

ENSG00000248115

ENST00000504048

N/A

0.706±0.00

0.120±0.00

N/A

0.208±0.00

N/A

0.113±0.00

0.518±0.00

N/A

0.066±0.00

0.359±0.00

ENST00000508813

N/A

0.105±0.00

0.296±0.00

N/A

0.036±0.00

0.015±0.00

N/A

0.219±0.00

N/A

ENST00000510351

N/A

0.010±0.00

N/A

0.096±0.00

0.029±0.02

0.137±0.00

0.164±0.00

0.049±0.00

0.063±0.05

0.271±0.00

N/A

0.083±0.07

0.055±0.03

0.380±0.00

ENSG00000250302

ENST00000514957

N/A

0.016±0.00

N/A

0.291±0.00

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000029227

ENSMUST00000080164

3.664±0.47

2.747±0.97

6.029±0.16

10.895±4.42

2.778±0.66

3.692±0.73

2.302±0.37

3.360±0.47

3.892±1.42

4.353±1.30

1.465±0.59

4.893±2.66

3.444±0.65

1.392±0.00

ENSMUST00000113534

N/A

2.508±0.00

ENSMUST00000113535

N/A

12.192±0.00

2.981±0.00

N/A

1.891±0.00

N/A

5.331±3.42

N/A

2.691±0.00

27.077±0.00

14.889±10.04

4.104±0.55

ENSMUST00000113536

5.055±0.38

N/A

4.589±0.56

10.155±0.00

2.492±0.00

N/A

2.827±1.21

2.640±0.53

5.449±2.67

3.468±0.59

3.266±0.72

9.539±4.57

10.251±3.05

4.469±1.19

ENSMUST00000120618

N/A

ENSMUST00000121950

N/A

9.279±0.00

9.135±0.00

2.833±0.24

ENSMUST00000122245

N/A

6.794±1.60

N/A

4.046±0.58

5.491±0.93

N/A

3.460±0.77

3.511±0.74

3.841±0.34

N/A

8.425±3.36

7.144±0.00

N/A

ENSMUST00000125129

N/A

18.815±0.00

ENSMUST00000135377

N/A

2.128±0.00

N/A

1.515±0.00

ENSMUST00000139697

N/A

15.346±0.00

N/A

ENSMUSG00000049907

ENSMUST00000051937

9.186±2.81

24.452±0.82

45.301±8.78

11.148±9.17

5.547±2.01

10.192±0.87

15.246±1.03

20.833±1.51

3.466±0.45

19.126±2.73

1.460±0.28

27.479±7.81

11.258±5.23

1.948±0.78

ENSMUST00000183995

N/A

ENSMUSG00000053656

ENSMUST00000066220

N/A

0.034±0.01

N/A

ENSMUST00000117249

N/A

0.682±0.00

N/A

0.113±0.02

1.622±0.55

1.898±1.36

N/A

ENSMUST00000120364

4.542±2.70

N/A

22.635±8.33

15.153±11.72

3.820±1.22

3.296±0.73

3.021±1.08

4.680±0.84

13.269±13.52

3.350±0.50

0.955±0.27

7.456±2.63

6.208±2.81

3.441±0.44

ENSMUST00000132389

2.094±0.19

3.557±1.08

7.015±0.00

2.508±1.23

3.698±1.21

5.069±0.86

0.784±0.29

1.265±0.54

2.642±2.30

2.228±0.86

0.118±0.00

8.646±3.51

1.146±0.47

0.468±0.25

ENSMUSG00000054814

ENSMUST00000068058

4.889±1.00

2.426±0.44

6.110±2.54

7.434±1.28

3.765±0.65

2.206±0.38

4.386±0.72

4.738±0.33

3.684±2.33

7.023±1.18

1.839±0.27

6.015±2.38

6.799±2.42

2.269±1.83

ENSMUST00000119154

N/A

2.670±0.00

N/A

ENSMUST00000128750

N/A

1.763±0.00

N/A

10.650±0.00

N/A

1.657±0.18

N/A

0.975±0.25

N/A

5.386±3.49

11.138±4.65

4.652±1.11

ENSMUST00000145016

N/A

ENSMUST00000150009

N/A

ENSMUST00000152408

N/A

ENSMUSG00000062110

ENSMUST00000072857

1.296±0.36

2.191±0.11

1.378±0.18

1.683±0.15

1.364±0.70

1.256±0.34

N/A

1.075±0.27

1.037±0.37

1.401±0.13

0.809±0.24

1.421±0.62

0.782±0.27

1.187±0.21

ENSMUST00000075848

1.267±0.11

2.104±0.46

N/A

1.445±0.32

1.513±0.36

0.429±0.00

0.801±0.31

0.617±0.07

0.970±0.29

N/A

1.945±1.09

N/A

ENSMUST00000113542

N/A

0.586±0.00

0.947±0.00

3.160±0.00

N/A

0.900±0.10

0.716±0.07

0.836±0.47

0.735±0.00

0.926±0.15

1.821±0.40

1.378±0.48

2.435±0.17

ENSMUST00000121330

2.086±0.40

1.888±0.40

1.331±0.49

2.293±1.22

2.170±1.08

1.811±1.21

1.664±0.32

1.674±0.62

1.471±0.42

1.828±0.26

1.002±0.18

1.854±0.57

2.140±0.71

1.306±0.14

ENSMUST00000123203

N/A

4.085±0.00

N/A

ENSMUST00000142216

N/A

ENSMUST00000146015

N/A

2.274±0.17

3.300±0.37

N/A

2.196±0.31

4.792±0.00

5.093±1.02

5.412±1.68

ENSMUST00000148994

N/A

ENSMUST00000151474

0.660±0.00

1.055±0.00

0.325±0.00

N/A

0.759±0.00

0.659±0.10

N/A

0.386±0.02

0.439±0.14

0.500±0.05

N/A

0.740±0.29

0.420±0.00

N/A

ENSMUSG00000080700

ENSMUST00000119196

N/A

0.215±0.00

0.037±0.01

0.337±0.00

0.220±0.05

0.384±0.00

0.109±0.00

N/A

1.072±0.95

0.121±0.00

0.127±0.00

0.440±0.03

0.136±0.03

0.156±0.06

ENSMUSG00000084132

ENSMUST00000121681

0.072±0.00

N/A

0.051±0.03

0.046±0.03

0.331±0.24

N/A

0.162±0.12

0.762±0.66

0.173±0.10

0.095±0.01

0.167±0.06

0.113±0.09

0.077±0.00

ENSMUSG00000093355

ENSMUST00000175614

N/A

155.406±0.00

N/A

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

Loading