C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SKI/DACH domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054074 Skida1 10090 - 2:18040676-18049051 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066885 Skida1-201 18045253-18048449 protein_coding
  ENSMUST00000091420 Skida1-001 18044083-18049051 protein_coding
  ENSMUST00000142856 Skida1-003 18047716-18048784 protein_coding
  ENSMUST00000152908 Skida1-002 18048144-18049031 protein_coding
  ENSMUST00000173604 Skida1-004 18040676-18044572 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066885ENSMUST00000091420ENSMUST00000142856ENSMUST00000152908ENSMUST00000173604
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066885 0.919±0.43 0.355±0.07 1.045±0.27 3.121±1.38 0.568±0.24 0.262±0.07 0.391±0.00 0.937±0.19 0.182±0.09 0.663±0.20 0.051±0.02 0.859±0.30 0.189±0.08 0.076±0.06
ENSMUST00000091420 0.267±0.11 1.156±0.44 1.588±0.27 8.395±2.66 0.311±0.21 0.319±0.13 0.140±0.00 0.691±0.13 0.210±0.13 1.104±0.18 0.065±0.01 0.877±0.35 0.535±0.22 0.032±0.00
ENSMUST00000142856 N/A 1.971±0.99 N/A N/A 1.187±0.04 N/A N/A N/A N/A 1.417±0.00 N/A N/A N/A 0.081±0.00
ENSMUST00000152908 N/A N/A N/A N/A 4.797±0.00 N/A 2.632±0.00 N/A N/A N/A 0.212±0.00 N/A N/A 0.286±0.13
ENSMUST00000173604 N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096N CIL_00096N_0002 VISTA 2:17746233-18347055
CIL_000781 CIL_000781_0003 CGP 2:18040676-18212388

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077318 C24H17orf96 chromosome 17 open reading frame 96 protein_coding Danio_rerio
ENSG00000180592 SKIDA1 SKI/DACH domain containing 1 protein_coding Homo_sapiens

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