C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 5830411N06 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054672 5830411N06Rik 10090 + 7:140247301-140299791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059882 5830411N06Rik-201 140247301-140297641 protein_coding
  ENSMUST00000093984 5830411N06Rik-202 140247381-140299791 protein_coding
  ENSMUST00000164583 5830411N06Rik-203 140247378-140299791 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059882ENSMUST00000093984ENSMUST00000164583
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059882 0.010±0.00 0.010±0.00 0.005±0.00 N/A 0.055±0.03 N/A 0.013±0.00 0.004±0.00 0.054±0.03 0.050±0.00 0.035±0.00 0.016±0.00 0.041±0.01
ENSMUST00000093984 0.021±0.01 0.030±0.01 0.010±0.01 0.837±0.35 N/A 0.058±0.01 0.036±0.02 0.006±0.00 0.192±0.06 0.061±0.04 0.076±0.03 0.012±0.01 0.061±0.01
ENSMUST00000164583 N/A 0.022±0.00 N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002365 IDA gamma-delta T cell lineage commitment
GO:0003674 ND molecular_function
GO:0005044 IEA scavenger receptor activity
GO:0006898 IEA receptor-mediated endocytosis
GO:0009897 IDA external side of plasma membrane
GO:0032620 IDA interleukin-17 production

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078502 CD163 molecule protein_coding Danio_rerio

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