C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 5830411N06 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164583 5830411N06Rik-203 ENSMUSG00000054672 10090 + 7:140247378-140299791 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonENSMUST00000164583
Transcript ID Bladder Colon
ENSMUST00000164583 0.022±0.00 0.088±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002365 IDA gamma-delta T cell lineage commitment
GO:0003674 ND molecular_function
GO:0005044 IEA scavenger receptor activity
GO:0006898 IEA receptor-mediated endocytosis
GO:0009897 IDA external side of plasma membrane
GO:0032620 IDA interleukin-17 production

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330163 DMBT1-003 protein_coding Homo_sapiens 0.00000000002 77
ENST00000338354 DMBT1-001 protein_coding Homo_sapiens 0.00000000003 77
ENST00000344338 DMBT1-002 protein_coding Homo_sapiens 0.00000000003 77
ENST00000368909 DMBT1-202 protein_coding Homo_sapiens 0.00000000003 77
ENST00000368955 DMBT1-203 protein_coding Homo_sapiens 0.00000000003 77
ENST00000368956 DMBT1-204 protein_coding Homo_sapiens 0.00000000002 77
ENST00000619379 DMBT1-205 protein_coding Homo_sapiens 0.00000000003 77

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