C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 8 family, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054720 Lrrc8c 10090 + 5:105519388-105613018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067924 Lrrc8c-001 105519388-105613018 protein_coding
  ENSMUST00000150981 Lrrc8c-002 105519416-105579569 protein_coding
  ENSMUST00000153754 Lrrc8c-004 105558858-105606872 protein_coding
  ENSMUST00000153955 Lrrc8c-003 105519473-105544640 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067924ENSMUST00000150981ENSMUST00000153754
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067924 6.333±0.24 6.096±0.72 2.594±0.01 2.445±1.22 6.420±2.10 2.832±0.32 5.143±0.51 2.701±0.22 2.475±2.10 15.075±1.21 1.174±0.10 6.844±1.84 3.305±1.26 1.319±0.62
ENSMUST00000150981 N/A 21.199±3.88 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153754 N/A N/A N/A N/A 6.707±0.40 3.263±1.28 N/A 2.750±0.24 0.536±0.00 N/A N/A 6.804±0.00 N/A 3.759±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069C CIL_00069C_0002 CGP 5:105415775-105613018

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0045444 IDA fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059718 lrrc8c leucine rich repeat containing 8 family, member C protein_coding Danio_rerio
ENSG00000171488 LRRC8C leucine rich repeat containing 8 family, member C protein_coding Homo_sapiens

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