C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00069C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197147-ENSG00000171488 CGP 9606 1:89524836-89769903
GeneTranscriptPositionBiotype
ENSG00000171488 (LRRC8C)
leucine rich repeat containing 8 family, member C 		ENST00000370454 (LRRC8C-001) 89633072-89719533 protein_coding
ENST00000416805 (LRRC8C-005) 89763545-89769903 processed_transcript
ENST00000479252 (LRRC8C-003) 89633072-89764518 processed_transcript
ENST00000482063 (LRRC8C-002) 89633181-89708648 nonsense_mediated_decay
ENSG00000197147 (LRRC8B)
leucine rich repeat containing 8 family, member B 		ENST00000330947 (LRRC8B-001) 89524903-89597864 protein_coding
ENST00000358200 (LRRC8B-201) 89568471-89584462 protein_coding
ENST00000439853 (LRRC8B-202) 89568241-89597859 protein_coding
ENST00000449440 (LRRC8B-003) 89524836-89582961 protein_coding
ENSG00000226394 (RP11-413E1.2)
 ENST00000440817 (RP11-413E1.2-001) 89661212-89661353 processed_pseudogene
ENSG00000230735 (RP11-413E1.4)
 ENST00000429074 (RP11-413E1.4-001) 89629725-89676386 sense_intronic
ENSG00000231999 (FLJ27354)
uncharacterized LOC400761 		ENST00000415584 (FLJ27354-002) 89624850-89632894 antisense
ENST00000443562 (FLJ27354-001) 89583241-89632191 antisense
ENST00000526694 (FLJ27354-003) 89626261-89632747 antisense
ENST00000528692 (FLJ27354-004) 89631876-89632761 antisense
CIL_00069C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070639-ENSMUSG00000054720 CGP 10090 5:105415775-105613018
GeneTranscriptPositionBiotype
ENSMUSG00000054720 (Lrrc8c)
leucine rich repeat containing 8 family, member C 		ENSMUST00000067924 (Lrrc8c-001) 105519388-105613018 protein_coding
ENSMUST00000150981 (Lrrc8c-002) 105519416-105579569 protein_coding
ENSMUST00000153754 (Lrrc8c-004) 105558858-105606872 protein_coding
ENSMUST00000153955 (Lrrc8c-003) 105519473-105544640 retained_intron
ENSMUSG00000070639 (Lrrc8b)
leucine rich repeat containing 8 family, member B 		ENSMUST00000112707 (Lrrc8b-201) 105415775-105486189 protein_coding
ENSMUSG00000085771 (C230066G23Rik)
RIKEN cDNA C230066G23 gene 		ENSMUST00000150195 (C230066G23Rik-001) 105580440-105581772 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069C_0001ENSG00000171488ENST00000370454ENST00000416805ENST00000479252ENST00000482063ENSG00000197147ENST00000330947ENST00000358200ENST00000439853ENST00000449440ENSG00000226394ENST00000440817ENSG00000230735ENST00000429074ENSG00000231999ENST00000415584ENST00000443562ENST00000526694ENST00000528692CIL_00069C_0002ENSMUSG00000054720ENSMUST00000067924ENSMUST00000150981ENSMUST00000153754ENSMUST00000153955ENSMUSG00000070639ENSMUST00000112707ENSMUSG00000085771ENSMUST00000150195
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069C_0001ENSG00000171488ENST00000370454ENST00000479252ENSG00000197147ENST00000330947ENST00000358200ENST00000439853ENSG00000226394ENST00000440817ENSG00000230735ENST00000429074ENSG00000231999ENST00000415584CIL_00069C_0002ENSMUSG00000054720ENSMUST00000067924ENSMUST00000150981ENSMUST00000153754ENSMUSG00000070639ENSMUST00000112707ENSMUSG00000085771ENSMUST00000150195
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171488 ENST00000370454 5.431±0.00 2.247±0.00 1.221±0.00 3.087±1.39 2.392±1.68 1.883±0.14 2.387±0.68 1.299±0.16 1.738±1.29 4.477±1.32 0.460±0.20 1.771±0.70 1.689±0.35 2.553±0.43
ENST00000416805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.060±0.00
ENST00000482063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197147 ENST00000330947 N/A 0.622±0.00 N/A 3.595±1.93 N/A N/A N/A 0.579±0.00 0.262±0.00 1.101±0.00 N/A 0.624±0.00 N/A N/A
ENST00000358200 N/A N/A N/A N/A N/A N/A 0.456±0.00 0.576±0.00 N/A N/A 0.653±0.00 N/A N/A 4.375±1.22
ENST00000439853 1.630±0.00 0.976±0.00 0.505±0.00 4.833±0.00 1.658±0.00 1.078±0.03 0.504±0.08 0.110±0.00 0.708±0.06 1.045±0.00 0.666±0.51 0.796±0.72 0.336±0.14 1.344±0.00
ENST00000449440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226394 ENST00000440817 N/A 0.504±0.00 N/A N/A 18.383±0.00 N/A N/A N/A N/A N/A 0.424±0.00 N/A N/A 0.111±0.00
ENSG00000230735 ENST00000429074 0.118±0.00 0.121±0.00 N/A N/A 0.275±0.00 N/A 0.138±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000231999 ENST00000415584 N/A N/A N/A N/A N/A N/A N/A 0.554±0.00 N/A N/A N/A N/A N/A N/A
ENST00000443562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000054720 ENSMUST00000067924 6.333±0.24 6.096±0.72 2.594±0.01 2.445±1.22 6.420±2.10 2.832±0.32 5.143±0.51 2.701±0.22 2.475±2.10 15.075±1.21 1.174±0.10 6.844±1.84 3.305±1.26 1.319±0.62
ENSMUST00000150981 N/A 21.199±3.88 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153754 N/A N/A N/A N/A 6.707±0.40 3.263±1.28 N/A 2.750±0.24 0.536±0.00 N/A N/A 6.804±0.00 N/A 3.759±0.30
ENSMUST00000153955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000070639 ENSMUST00000112707 3.530±0.76 35.655±7.16 0.893±0.00 4.437±1.69 4.377±2.71 5.339±1.10 1.219±0.44 7.773±2.65 0.720±0.85 12.822±2.16 0.235±0.05 9.750±0.80 3.392±0.13 234.747±104.02
ENSMUSG00000085771 ENSMUST00000150195 0.128±0.06 N/A 0.043±0.00 0.245±0.27 N/A N/A 0.083±0.03 0.072±0.00 0.059±0.02 0.271±0.23 N/A 0.482±0.00 0.190±0.18 0.226±0.00

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