C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700013H16 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054727 1700013H16Rik 10090 - X:53742901-53757831 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067940 1700013H16Rik-001 53742901-53757831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000067940
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000067940 0.006±0.00 0.015±0.01 0.010±0.00 0.027±0.00 0.023±0.00 0.164±0.13 10.199±12.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0001741 IDA XY body
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013438 sycp3 synaptonemal complex protein 3 protein_coding Danio_rerio
ENSG00000139351 SYCP3 synaptonemal complex protein 3 protein_coding Homo_sapiens

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