C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fibronectin type III and SPRY domain containing 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054752 Fsd1l 10090 + 4:53631471-53707009 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000107643 Fsd1l-002 53631490-53651790 retained_intron
  ENSMUST00000129648 Fsd1l-003 53631716-53659678 nonsense_mediated_decay
  ENSMUST00000132151 Fsd1l-001 53631471-53707009 protein_coding
  ENSMUST00000159415 Fsd1l-005 53631569-53701153 protein_coding
  ENSMUST00000162270 Fsd1l-006 53631491-53647899 retained_intron
  ENSMUST00000163067 Fsd1l-004 53631574-53701151 protein_coding
  ENSMUST00000180164 Fsd1l-201 53643280-53707009 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129648ENSMUST00000132151ENSMUST00000163067ENSMUST00000180164
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129648 N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132151 0.695±0.27 0.556±0.17 1.193±0.12 2.113±1.34 0.357±0.00 0.609±0.24 2.083±0.94 0.346±0.11 0.191±0.11 0.953±0.08 0.594±0.17 0.964±0.50 0.350±0.15 1.033±0.52
ENSMUST00000163067 N/A N/A N/A 2.997±0.00 N/A N/A N/A N/A N/A N/A N/A 1.207±0.00 0.616±0.00 3.004±0.00
ENSMUST00000180164 0.536±0.05 0.608±0.00 0.933±0.38 4.213±0.00 0.255±0.08 0.273±0.02 0.644±0.00 0.311±0.00 0.089±0.07 0.743±0.00 0.714±0.51 0.589±0.26 0.653±0.33 0.867±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033S CIL_00033S_0002 CGP 4:53440413-53707009
CIL_00033Y CIL_00033Y_0002 CGP 4:53631471-53765785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059432 fsd1l fibronectin type III and SPRY domain containing 1-like protein_coding Danio_rerio
ENSG00000106701 FSD1L fibronectin type III and SPRY domain containing 1-like protein_coding Homo_sapiens

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