C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium channel tetramerisation domain containing 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054770 Kctd18 10090 - 1:57955101-58018956 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068000 Kctd18-003 57960054-57970052 retained_intron
  ENSMUST00000114410 Kctd18-001 57955248-57970128 protein_coding
  ENSMUST00000159826 Kctd18-006 57956580-57970048 protein_coding
  ENSMUST00000160130 Kctd18-005 57963602-57970079 retained_intron
  ENSMUST00000160614 Kctd18-007 57956692-57963447 retained_intron
  ENSMUST00000161608 Kctd18-002 57955253-57969524 nonsense_mediated_decay
  ENSMUST00000162410 Kctd18-004 57963566-57970079 retained_intron
  ENSMUST00000163006 Kctd18-008 57956720-57962102 retained_intron
  ENSMUST00000163061 Kctd18-009 57956072-58018956 nonsense_mediated_decay
  ENSMUST00000164963 Kctd18-201 57955101-57970084 protein_coding
  ENSMUST00000189298 Kctd18-010 57961158-57962981 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068000ENSMUST00000114410ENSMUST00000160130ENSMUST00000161608ENSMUST00000162410ENSMUST00000164963ENSMUST00000189298
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068000 N/A N/A N/A 0.549±0.00 N/A N/A N/A N/A 0.264±0.05 N/A N/A 1.634±0.27 N/A N/A
ENSMUST00000114410 1.810±0.63 1.724±0.02 3.874±0.56 5.467±0.82 1.664±0.03 1.652±0.78 1.038±0.27 1.549±0.41 1.291±0.83 1.867±0.39 1.245±0.39 1.980±0.68 3.453±1.08 3.052±0.69
ENSMUST00000160130 0.998±0.16 N/A 0.840±0.00 N/A 0.758±0.11 0.527±0.00 0.371±0.03 0.372±0.07 N/A 1.064±0.10 0.286±0.00 1.018±0.06 N/A N/A
ENSMUST00000161608 2.110±0.30 2.215±0.49 2.229±0.82 N/A 1.760±0.52 N/A 0.793±0.01 0.825±0.00 0.980±0.14 1.708±0.14 0.953±0.20 2.570±0.46 2.764±0.56 2.474±0.02
ENSMUST00000162410 N/A 1.678±0.43 N/A N/A 1.945±0.00 0.983±0.17 N/A N/A 0.420±0.16 1.511±0.19 N/A 2.331±0.61 N/A N/A
ENSMUST00000164963 1.575±0.00 1.743±0.00 N/A N/A 2.259±0.00 0.790±0.00 N/A N/A N/A 1.461±0.00 0.988±0.00 2.423±0.66 N/A N/A
ENSMUST00000189298 N/A N/A N/A N/A N/A 1.121±0.00 N/A N/A N/A N/A N/A 1.674±0.30 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B2 CIL_0002B2_0002 CGP 1:57774162-58018956
CIL_0002AZ CIL_0002AZ_0002 CGP 1:57955101-58025899

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000155729 KCTD18 potassium channel tetramerization domain containing 18 protein_coding Homo_sapiens

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