C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lamin tail domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054966 Ifltd1 10090 - 6:145365134-145614319 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000111706 Ifltd1-002 145393459-145450767 protein_coding
  ENSMUST00000111708 Ifltd1-001 145397210-145434925 protein_coding
  ENSMUST00000142122 Ifltd1-004 145580541-145613969 processed_transcript
  ENSMUST00000144829 Ifltd1-005 145543291-145614319 processed_transcript
  ENSMUST00000148739 Ifltd1-003 145365134-145614273 nonsense_mediated_decay
  ENSMUST00000149666 Ifltd1-006 145429997-145434081 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111706ENSMUST00000111708ENSMUST00000142122ENSMUST00000144829ENSMUST00000148739ENSMUST00000149666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111706 0.609±0.11 0.155±0.07 0.054±0.01 0.168±0.10 0.104±0.06 0.086±0.03 2.318±0.33 0.121±0.03 0.020±0.01 N/A 0.020±0.00 0.380±0.18 0.105±0.01 N/A
ENSMUST00000111708 N/A 0.045±0.00 N/A N/A 0.069±0.00 0.058±0.02 N/A 0.048±0.00 0.010±0.00 N/A 0.027±0.00 0.099±0.00 0.093±0.05 8.018±2.77
ENSMUST00000142122 N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 0.012±0.01 0.279±0.00 0.036±0.03 0.163±0.00 N/A N/A
ENSMUST00000144829 N/A 0.096±0.00 N/A N/A N/A N/A N/A 0.080±0.00 N/A 1.180±0.33 N/A N/A 0.238±0.11 N/A
ENSMUST00000148739 N/A 0.080±0.04 0.011±0.00 N/A 0.049±0.01 0.022±0.00 N/A 0.026±0.01 0.004±0.00 0.324±0.14 0.011±0.00 0.099±0.03 0.043±0.00 N/A
ENSMUST00000149666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00 15.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X7 CIL_0004X7_0002 CGP 6:145216699-145614319

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005634 IDA nucleus
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005882 IEA intermediate filament
GO:0008283 IDA cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000152936 LMNTD1 lamin tail domain containing 1 protein_coding Homo_sapiens

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