C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microtubule-associated protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055407 Map6 10090 + 7:99267447-99337137 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068973 Map6-001 99267447-99337136 protein_coding
  ENSMUST00000107100 Map6-201 99268346-99337137 protein_coding
  ENSMUST00000122101 Map6-003 99267447-99337136 protein_coding
  ENSMUST00000127492 Map6-002 99267489-99320352 retained_intron
  ENSMUST00000129058 Map6-004 99321200-99322455 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068973ENSMUST00000107100ENSMUST00000122101ENSMUST00000127492ENSMUST00000129058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068973 N/A N/A N/A 28.098±0.00 N/A 0.425±0.17 N/A N/A 0.005±0.00 N/A 0.185±0.06 N/A N/A 0.349±0.00
ENSMUST00000107100 7.948±3.05 1.047±0.18 6.219±0.03 15.530±5.02 3.752±0.56 1.759±0.31 1.148±0.18 0.784±0.22 0.027±0.01 10.525±0.62 0.769±0.14 2.505±0.72 3.135±1.45 0.956±0.37
ENSMUST00000122101 N/A 0.916±0.11 N/A 9.256±0.00 0.538±0.07 0.386±0.00 0.168±0.03 N/A 0.012±0.00 N/A 0.447±0.00 0.388±0.00 N/A N/A
ENSMUST00000127492 1.284±0.42 0.312±0.06 N/A 28.557±18.40 1.373±0.00 0.281±0.04 0.117±0.01 0.114±0.04 0.021±0.02 1.091±0.08 0.089±0.03 0.285±0.10 0.400±0.31 1.027±0.31
ENSMUST00000129058 0.067±0.02 0.217±0.01 0.038±0.02 4.342±0.00 0.195±0.02 0.182±0.05 0.042±0.00 N/A 0.007±0.00 0.282±0.12 0.075±0.02 0.235±0.06 0.235±0.14 0.133±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0002 VISTA 7:99059661-99661402
CIL_0004S4 CIL_0004S4_0002 CGP 7:99219084-99337137

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005794 IEA Golgi apparatus
GO:0005874 IEA microtubule
GO:0006810 IEA transport
GO:0008017 IDA microtubule binding
GO:0032418 ISS lysosome localization
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048813 ISS dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074073 MAP6 microtubule-associated protein 6 protein_coding Danio_rerio
ENSDARG00000074521 map6a microtubule-associated protein 6a protein_coding Danio_rerio
ENSG00000171533 MAP6 microtubule-associated protein 6 protein_coding Homo_sapiens

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