C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Hoxa distal transcript antisense RNA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055408 Hottip 10090 + 6:52262775-52267603 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000141300 Hottip-001 52262784-52267079 lincRNA
  ENSMUST00000152875 Hottip-002 52262775-52267603 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungMusclePlacentaTestisENSMUST00000141300ENSMUST00000152875
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000141300 0.057±0.00 0.717±0.19 N/A 3.528±1.16 N/A N/A N/A 0.036±0.01 0.116±0.13 N/A
ENSMUST00000152875 0.025±0.01 0.990±0.00 0.007±0.00 1.894±0.00 0.027±0.01 0.026±0.00 0.050±0.00 0.029±0.01 0.023±0.02 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0003 UCNEbase 6:51462736-52602127
CIL_0008QL CIL_0008QL_0002 VISTA 6:51878169-52478777
CIL_000911 CIL_000911_0002 VISTA 6:51970433-52571615
CIL_000811 CIL_000811_0002 VISTA 6:52019082-52620287
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003P5 CIL_0003P5_0002 CGP 6:52257694-52318378

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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