C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gasdermin C2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056293 Gsdmc2 10090 - 15:63824346-63845177 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089900 Gsdmc2-201 63824346-63835949 protein_coding
  ENSMUST00000188404 Gsdmc2-001 63824346-63845177 protein_coding
  ENSMUST00000188691 Gsdmc2-002 63824482-63845162 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000089900ENSMUST00000188404ENSMUST00000188691
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000089900 1.791±1.12 74.666±3.02 0.008±0.00 25.322±9.32 0.819±0.53 0.015±0.01 0.205±0.13 0.130±0.05 0.014±0.02 0.447±0.23
ENSMUST00000188404 N/A 144.141±17.13 N/A 22.667±3.72 0.681±0.33 N/A N/A N/A N/A N/A
ENSMUST00000188691 0.511±0.00 37.692±14.57 N/A 17.759±1.04 0.474±0.12 0.104±0.00 N/A 0.125±0.04 N/A 0.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D6 CIL_0008D6_0002 VISTA 15:63374092-63976818
CIL_0007U4 CIL_0007U4_0002 VISTA 15:63374837-63976253

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0060576 IEP intestinal epithelial cell development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000147697 GSDMC gasdermin C protein_coding Homo_sapiens

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