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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, N polypeptide 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056553 Ptprn2 10090 + 12:116485720-117276849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070733 Ptprn2-002 116485833-117276793 protein_coding
  ENSMUST00000185505 Ptprn2-003 116485720-116773330 processed_transcript
  ENSMUST00000189009 Ptprn2-005 116485729-117123467 processed_transcript
  ENSMUST00000190247 Ptprn2-001 116485729-117276849 nonsense_mediated_decay
  ENSMUST00000191106 Ptprn2-004 116485770-116844989 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070733ENSMUST00000185505ENSMUST00000189009ENSMUST00000190247ENSMUST00000191106
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070733 0.050±0.01 1.934±0.71 42.004±37.16 0.151±0.06 6.129±2.25 0.120±0.03 0.355±0.10 0.053±0.01 0.449±0.16 0.017±0.00 0.232±0.11 0.528±0.46 0.122±0.02
ENSMUST00000185505 N/A 7.830±2.08 N/A 0.087±0.03 N/A N/A N/A 0.022±0.00 N/A N/A 0.184±0.03 N/A 0.444±0.20
ENSMUST00000189009 N/A N/A N/A 0.092±0.00 N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A
ENSMUST00000190247 N/A 5.305±1.03 N/A 0.130±0.01 10.701±3.34 0.107±0.00 0.105±0.03 N/A 0.231±0.19 N/A 0.130±0.09 0.539±0.33 N/A
ENSMUST00000191106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005H8 CIL_0005H8_0002 CGP 12:116405402-117276849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005788 IEA endoplasmic reticulum lumen
GO:0016021 IEA integral component of membrane
GO:0030141 IDA secretory granule
GO:0034260 IEA negative regulation of GTPase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0043195 IEA terminal bouton
GO:0043235 ISO receptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035970 ptprn2 protein tyrosine phosphatase, receptor type, N polypeptide 2 protein_coding Danio_rerio
ENSG00000155093 PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 protein_coding Homo_sapiens

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