C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-Coenzyme A binding domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056938 Acbd4 10090 + 11:103101682-103112200 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024492 Acbd4-201 103101688-103112199 protein_coding
  ENSMUST00000092559 Acbd4-002 103101682-103112200 nonsense_mediated_decay
  ENSMUST00000107040 Acbd4-001 103101682-103112197 protein_coding
  ENSMUST00000124965 Acbd4-013 103106204-103112197 processed_transcript
  ENSMUST00000129870 Acbd4-006 103103021-103105466 nonsense_mediated_decay
  ENSMUST00000130749 Acbd4-009 103101686-103104021 processed_transcript
  ENSMUST00000134884 Acbd4-005 103101712-103104174 protein_coding
  ENSMUST00000139374 Acbd4-007 103103074-103105451 processed_transcript
  ENSMUST00000140372 Acbd4-010 103101686-103105392 protein_coding
  ENSMUST00000142630 Acbd4-003 103103252-103104482 retained_intron
  ENSMUST00000146176 Acbd4-004 103101709-103103385 retained_intron
  ENSMUST00000147701 Acbd4-011 103103108-103104098 retained_intron
  ENSMUST00000150780 Acbd4-012 103104705-103111953 retained_intron
  ENSMUST00000152971 Acbd4-008 103103076-103104846 protein_coding
  ENSMUST00000161013 Acbd4-014 103106183-103111739 processed_transcript
  ENSMUST00000162338 Acbd4-015 103101726-103103223 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024492ENSMUST00000092559ENSMUST00000107040ENSMUST00000124965ENSMUST00000129870ENSMUST00000139374ENSMUST00000146176ENSMUST00000150780ENSMUST00000162338
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024492 23.124±8.42 12.962±3.06 8.885±2.08 1.355±1.13 10.740±4.19 4.940±1.03 3.403±1.52 16.298±9.50 3.470±0.51 6.433±1.27 2.683±0.73 3.289±1.26 2.455±1.19 0.890±0.38
ENSMUST00000092559 N/A 6.605±0.00 5.958±0.00 N/A N/A N/A N/A 6.268±0.00 1.258±0.00 5.754±0.37 N/A 3.623±0.00 9.537±0.00 N/A
ENSMUST00000107040 8.422±3.16 5.960±1.28 5.148±0.30 1.310±1.22 10.130±2.04 2.593±0.05 1.825±0.17 10.824±2.52 3.159±0.29 4.536±1.43 4.429±1.39 2.781±1.43 1.772±0.01 0.410±0.08
ENSMUST00000124965 N/A N/A N/A 14.065±0.00 N/A N/A N/A N/A 11.835±1.87 N/A N/A 13.348±4.08 15.470±5.73 2.101±0.00
ENSMUST00000129870 21.723±10.46 N/A N/A N/A 16.269±0.00 4.500±0.37 N/A N/A 7.469±0.52 N/A 2.534±0.00 4.451±0.79 3.797±0.91 0.730±0.00
ENSMUST00000139374 N/A N/A N/A N/A N/A N/A N/A N/A 7.589±0.00 N/A N/A 7.070±0.62 3.071±0.00 N/A
ENSMUST00000146176 N/A 19.474±6.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.790±1.72 N/A N/A
ENSMUST00000150780 N/A N/A N/A 5.155±0.00 11.198±0.00 N/A N/A N/A 7.222±2.47 N/A N/A 8.290±1.66 5.580±4.09 0.407±0.00
ENSMUST00000162338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.230±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039B CIL_00039B_0002 CGP 11:103070304-103112200
CIL_0000RQ CIL_0000RQ_0002 CGP 11:103101682-103119725

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000062 IEA fatty-acyl-CoA binding
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027070 acbd4 acyl-CoA binding domain containing 4 protein_coding Danio_rerio
ENSG00000181513 ACBD4 acyl-CoA binding domain containing 4 protein_coding Homo_sapiens

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