C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-Coenzyme A binding domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107040 Acbd4-001 ENSMUSG00000056938 10090 + 11:103101682-103112197 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107040 8.422±3.16 5.960±1.28 5.148±0.30 1.310±1.22 10.130±2.04 2.593±0.05 1.825±0.17 10.824±2.52 3.159±0.29 4.536±1.43 4.429±1.39 2.781±1.43 1.772±0.01 0.410±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039B CIL_00039B_0002 CGP 11:103070304-103112200
CIL_0000RQ CIL_0000RQ_0002 CGP 11:103101682-103119725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321854 ACBD4-007 protein_coding Homo_sapiens 0 381
ENST00000376955 ACBD4-006 protein_coding Homo_sapiens 0 377
ENST00000398322 ACBD4-004 protein_coding Homo_sapiens 0 381
ENST00000431281 ACBD4-201 protein_coding Homo_sapiens 0 318
ENST00000585553 ACBD4-003 retained_intron Homo_sapiens 0 318
ENST00000586346 ACBD4-002 protein_coding Homo_sapiens 0 318
ENST00000589752 ACBD4-012 retained_intron Homo_sapiens 0 318
ENST00000589798 ACBD4-014 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000590289 ACBD4-011 retained_intron Homo_sapiens 0 318
ENST00000591136 ACBD4-013 processed_transcript Homo_sapiens 0 381
ENST00000591859 ACBD4-001 protein_coding Homo_sapiens 0 318
ENST00000592162 ACBD4-005 protein_coding Homo_sapiens 0 381
ENST00000619916 ACBD4-202 protein_coding Homo_sapiens 0 377

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