C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 5730455P16 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057181 5730455P16Rik 10090 - 11:80360492-80378034 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103225 5730455P16Rik-001 80360493-80378034 protein_coding
  ENSMUST00000134274 5730455P16Rik-003 80370418-80378034 protein_coding
  ENSMUST00000149614 5730455P16Rik-002 80363979-80368395 retained_intron
  ENSMUST00000179332 5730455P16Rik-201 80360492-80378015 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103225ENSMUST00000134274ENSMUST00000179332
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103225 2.604±0.79 1.875±0.00 3.556±0.26 5.173±0.69 2.216±0.88 0.390±0.06 3.221±0.29 2.741±0.51 1.861±0.46 2.311±1.14 13.032±0.65 3.174±1.54 1.207±0.38 1.049±0.32
ENSMUST00000134274 N/A 1.015±0.32 N/A 22.715±0.00 2.127±0.50 1.021±0.31 N/A N/A N/A 1.977±0.00 N/A 2.458±2.69 6.466±1.72 2.385±0.00
ENSMUST00000179332 2.591±0.00 2.491±0.30 N/A N/A 2.076±0.62 1.338±0.43 N/A 1.548±0.00 1.372±0.71 1.813±0.14 N/A 2.103±0.66 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VP CIL_0000VP_0002 CGP 11:80300912-80378034
CIL_0005IX CIL_0005IX_0002 CGP 11:80360492-80405733

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061257 C3H17orf75 chromosome 17 open reading frame 75 protein_coding Danio_rerio
ENSG00000108666 C17orf75 chromosome 17 open reading frame 75 protein_coding Homo_sapiens

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