C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057286 St6galnac2 10090 - 11:116675303-116694868 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079545 St6galnac2-001 116675303-116694868 protein_coding
  ENSMUST00000123236 St6galnac2-004 116681683-116684816 processed_transcript
  ENSMUST00000129236 St6galnac2-005 116684916-116685917 processed_transcript
  ENSMUST00000135771 St6galnac2-003 116675889-116679678 processed_transcript
  ENSMUST00000144398 St6galnac2-002 116677483-116681290 processed_transcript
  ENSMUST00000145441 St6galnac2-006 116689967-116694609 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079545ENSMUST00000135771ENSMUST00000144398ENSMUST00000145441
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079545 6.875±2.13 3.340±0.68 13.023±1.17 0.854±0.21 5.610±1.31 14.355±4.13 2.414±0.55 36.765±2.69 0.664±0.35 18.925±3.54 0.770±0.44 3.327±0.67 12.339±3.09 N/A
ENSMUST00000135771 N/A N/A N/A 0.347±0.00 1.364±0.00 N/A N/A N/A N/A N/A 0.279±0.03 0.994±0.00 3.136±0.41 N/A
ENSMUST00000144398 3.102±0.00 0.767±0.00 N/A N/A 2.538±0.31 3.839±0.66 1.199±0.30 N/A N/A 5.823±2.00 0.913±0.19 1.756±0.05 N/A 115.821±0.00
ENSMUST00000145441 N/A 28.215±8.23 N/A N/A N/A 30.735±2.31 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000194 CIL_000194_0002 CGP 11:116675303-116775507

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006486 IEA protein glycosylation
GO:0008373 IEA sialyltransferase activity
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088182 ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein_coding Danio_rerio
ENSG00000070731 ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein_coding Homo_sapiens

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