C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small itegral membrane protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058351 Smim4 10090 - 14:31088869-31128930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049732 Smim4-201 31124506-31128930 protein_coding
  ENSMUST00000064032 Smim4-202 31088869-31128930 protein_coding
  ENSMUST00000090205 Smim4-203 31124802-31128930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049732ENSMUST00000064032ENSMUST00000090205
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049732 3.736±1.40 21.091±5.53 12.703±1.59 9.235±2.94 N/A 4.470±0.00 5.839±1.15 12.798±2.36 14.065±7.25 5.138±1.16 17.938±2.89 12.515±8.23 12.576±4.08 3.703±0.77
ENSMUST00000064032 N/A N/A N/A 0.964±0.00 N/A N/A N/A N/A N/A N/A N/A 1.276±0.00 N/A 0.721±0.00
ENSMUST00000090205 42.041±14.90 130.376±30.64 12.779±4.01 13.963±5.23 66.280±32.05 48.302±7.03 49.489±17.43 135.797±8.96 41.824±17.61 67.559±18.09 3.603±0.11 54.323±7.24 9.235±1.72 17.939±3.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089921 SMIM4 small integral membrane protein 4 protein_coding Danio_rerio
ENSG00000168273 SMIM4 small integral membrane protein 4 protein_coding Homo_sapiens

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