Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	small itegral membrane protein 4
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000058351	Smim4	10090	-	14:31088869-31128930	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000049732		Smim4-201	31124506-31128930	protein_coding
	ENSMUST00000064032		Smim4-202	31088869-31128930	protein_coding
	ENSMUST00000090205		Smim4-203	31124802-31128930	protein_coding
Mus musculus EnsemblGRCm38 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000049732	3.736±1.40	21.091±5.53	12.703±1.59	9.235±2.94	N/A	4.470±0.00	5.839±1.15	12.798±2.36	14.065±7.25	5.138±1.16	17.938±2.89	12.515±8.23	12.576±4.08	3.703±0.77
ENSMUST00000064032	N/A	N/A	N/A	0.964±0.00	N/A	N/A	N/A	N/A	N/A	N/A	N/A	1.276±0.00	N/A	0.721±0.00
ENSMUST00000090205	42.041±14.90	130.376±30.64	12.779±4.01	13.963±5.23	66.280±32.05	48.302±7.03	49.489±17.43	135.797±8.96	41.824±17.61	67.559±18.09	3.603±0.11	54.323±7.24	9.235±1.72	17.939±3.40

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007WP	CIL_0007WP_0002	VISTA	14:30932335-31535522

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003674	ND	molecular_function
GO:0005739	IDA	mitochondrion
GO:0008150	ND	biological_process
GO:0016021	IEA	integral component of membrane

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000089921	SMIM4	small integral membrane protein 4	protein_coding	Danio_rerio
ENSG00000168273	SMIM4	small integral membrane protein 4	protein_coding	Homo_sapiens

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