C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small itegral membrane protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049732 Smim4-201 ENSMUSG00000058351 10090 - 14:31124506-31128930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049732
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049732 3.736±1.40 21.091±5.53 12.703±1.59 9.235±2.94 4.470±0.00 5.839±1.15 12.798±2.36 14.065±7.25 5.138±1.16 17.938±2.89 12.515±8.23 12.576±4.08 3.703±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307106 SMIM4-002 protein_coding Homo_sapiens 3e-23 111
ENST00000476842 SMIM4-006 protein_coding Homo_sapiens 0 213
ENST00000477703 SMIM4-001 protein_coding Homo_sapiens 0 320
ENST00000482728 SMIM4-004 processed_transcript Homo_sapiens 5e-23 111
ENST00000491607 SMIM4-005 processed_transcript Homo_sapiens 3e-23 111

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