C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 420
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058402 Zfp420 10090 + 7:29859979-29877292 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057652 Zfp420-001 29860041-29876827 protein_coding
  ENSMUST00000074876 Zfp420-002 29859979-29876505 protein_coding
  ENSMUST00000130272 Zfp420-005 29872524-29874536 retained_intron
  ENSMUST00000145952 Zfp420-003 29860011-29877292 processed_transcript
  ENSMUST00000148489 Zfp420-004 29860004-29861614 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057652ENSMUST00000074876ENSMUST00000130272ENSMUST00000145952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057652 0.388±0.28 0.210±0.16 0.365±0.01 1.279±0.00 0.604±0.43 0.422±0.08 N/A 0.231±0.00 0.179±0.07 0.389±0.03 0.285±0.06 0.862±0.40 0.302±0.16 0.050±0.00
ENSMUST00000074876 0.503±0.28 0.296±0.16 0.624±0.13 1.385±0.31 0.483±0.18 0.190±0.07 0.160±0.06 0.369±0.16 0.173±0.06 0.568±0.23 0.274±0.03 0.763±0.13 0.175±0.00 0.240±0.02
ENSMUST00000130272 N/A 0.837±0.28 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.901±0.00 0.303±0.06
ENSMUST00000145952 N/A 0.225±0.05 1.325±0.00 1.417±1.06 0.383±0.02 0.164±0.04 N/A N/A 0.144±0.06 0.182±0.04 0.434±0.16 0.323±0.18 0.083±0.00 0.080±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WQ CIL_0004WQ_0004 CGP 7:29859979-29906572

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086353 CU207245.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087118 si:dkey-202n8.1 si:dkey-202n8.1 protein_coding Danio_rerio
ENSDARG00000087290 si:ch211-202h22.10 si:ch211-202h22.10 protein_coding Danio_rerio
ENSDARG00000087668 CABZ01061549.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087673 CR388132.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087721 BX004873.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087988 si:dkey-47k16.3 si:dkey-47k16.3 protein_coding Danio_rerio
ENSDARG00000088170 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000088888 si:ch211-209n20.58 si:ch211-209n20.58 protein_coding Danio_rerio
ENSDARG00000088914 CR628395.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089173 BX004873.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089376 CR792455.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089827 BX465848.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089950 BX936350.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090005 BX572103.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090090 CU302413.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090350 CABZ01000592.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090672 BX465848.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090915 CABZ01051641.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091010 AL929029.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091014 CU138542.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091491 BX511078.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092114 si:dkey-233e3.3 si:dkey-233e3.3 protein_coding Danio_rerio
ENSDARG00000092149 CR388095.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092861 si:dkey-257e4.5 si:dkey-257e4.5 protein_coding Danio_rerio
ENSDARG00000092942 CR388132.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093555 CT573234.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094054 BX324142.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094101 zgc:174700 zgc:174700 protein_coding Danio_rerio
ENSDARG00000094141 CR361547.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094572 si:dkey-149m13.2 si:dkey-149m13.2 protein_coding Danio_rerio
ENSDARG00000095030 CABZ01032468.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000095178 BX640584.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000096205 si:dkey-122c11.10 si:dkey-122c11.10 protein_coding Danio_rerio
ENSG00000197050 ZNF420 zinc finger protein 420 protein_coding Homo_sapiens

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