C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004WQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000091491-ENSDARG00000090420 CGP 7955 Zv9_scaffold3470:117830-200694
GeneTranscriptPositionBiotype
ENSDARG00000090420 (BX511078.1)
Uncharacterized protein 		ENSDART00000122771 (BX511078.1-201) 148144-200694 protein_coding
ENSDARG00000091491 (BX511078.2)
Uncharacterized protein 		ENSDART00000128015 (BX511078.2-201) 117830-187939 protein_coding
CIL_0004WQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204611-ENSG00000196267 CGP 9606 19:52113091-52171643
GeneTranscriptPositionBiotype
ENSG00000196267 (ZNF836)
zinc finger protein 836 		ENST00000322146 (ZNF836-201) 52154872-52160648 protein_coding
ENST00000596428 (ZNF836-004) 52157366-52170386 protein_coding
ENST00000597065 (ZNF836-002) 52160321-52171643 protein_coding
ENST00000597252 (ZNF836-001) 52154848-52171491 protein_coding
ENST00000599618 (ZNF836-006) 52153864-52154964 nonsense_mediated_decay
ENST00000602187 (ZNF836-003) 52165184-52169734 processed_transcript
ENSG00000204611 (ZNF616)
zinc finger protein 616 		ENST00000330123 (ZNF616-002) 52114790-52139746 protein_coding
ENST00000596290 (ZNF616-003) 52116913-52139922 protein_coding
ENST00000597013 (ZNF616-004) 52122269-52139904 protein_coding
ENST00000600228 (ZNF616-001) 52113091-52139917 protein_coding
ENST00000600282 (ZNF616-005) 52123944-52138825 protein_coding
ENSG00000243680 (RPL37P23)
ribosomal protein L37 pseudogene 23 		ENST00000492641 (RPL37P23-001) 52143043-52143336 processed_pseudogene
ENSG00000267927 (CTD-2525I3.2)
 ENST00000599775 (CTD-2525I3.2-001) 52171158-52177002 antisense
ENSG00000268458 (CTC-471J1.9)
 ENST00000597886 (CTC-471J1.9-001) 52142626-52144156 lincRNA

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CIL_0004WQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045519-ENSMUSG00000063108 CGP 10090 9:20345136-20460162
GeneTranscriptPositionBiotype
ENSMUSG00000045519 (Zfp560)
zinc finger protein 560 		ENSMUST00000068079 (Zfp560-001) 20345136-20385177 protein_coding
ENSMUST00000143992 (Zfp560-002) 20352523-20385177 retained_intron
ENSMUSG00000063108 (Zfp26)
zinc finger protein 26 		ENSMUST00000075263 (Zfp26-004) 20437062-20459989 retained_intron
ENSMUST00000098970 (Zfp26-002) 20435030-20459957 retained_intron
ENSMUST00000159569 (Zfp26-001) 20432972-20460160 protein_coding
ENSMUST00000160370 (Zfp26-005) 20438299-20441374 processed_transcript
ENSMUST00000161248 (Zfp26-003) 20442028-20460162 retained_intron
ENSMUST00000162438 (Zfp26-006) 20444317-20459827 protein_coding

Mus musculus Ensembl (GRCm38)

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CIL_0004WQ_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058402-ENSMUSG00000062040 CGP 10090 7:29859979-29906572
GeneTranscriptPositionBiotype
ENSMUSG00000058402 (Zfp420)
zinc finger protein 420 		ENSMUST00000057652 (Zfp420-001) 29860041-29876827 protein_coding
ENSMUST00000074876 (Zfp420-002) 29859979-29876505 protein_coding
ENSMUST00000130272 (Zfp420-005) 29872524-29874536 retained_intron
ENSMUST00000145952 (Zfp420-003) 29860011-29877292 processed_transcript
ENSMUST00000148489 (Zfp420-004) 29860004-29861614 retained_intron
ENSMUSG00000062040 (Zfp27)
zinc finger protein 27 		ENSMUST00000053521 (Zfp27-003) 29893716-29906104 protein_coding
ENSMUST00000159920 (Zfp27-002) 29893716-29906532 protein_coding
ENSMUST00000160411 (Zfp27-005) 29900237-29906060 processed_transcript
ENSMUST00000161904 (Zfp27-004) 29893715-29900488 protein_coding
ENSMUST00000162592 (Zfp27-001) 29893333-29906572 protein_coding
ENSMUST00000172448 (Zfp27-201) 29894079-29898863 protein_coding

Mus musculus Ensembl (GRCm38)

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CIL_0004WQ_0005 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000072763-ENSMUSG00000072762 CGP 10090 5:109674545-109751886
GeneTranscriptPositionBiotype
ENSMUSG00000072762 (4930522L14Rik)
RIKEN cDNA 4930522L14 gene 		ENSMUST00000100937 (4930522L14Rik-001) 109738831-109751886 protein_coding
ENSMUST00000112547 (4930522L14Rik-002) 109735990-109751597 protein_coding
ENSMUSG00000072763 (5430403G16Rik)
RIKEN cDNA 5430403G16 gene 		ENSMUST00000092720 (5430403G16Rik-001) 109674545-109691041 protein_coding

Mus musculus Ensembl (GRCm38)

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CIL_0004WQ_0006 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000091474-ENSMUSG00000074165 CGP 10090 7:41599261-41651534
GeneTranscriptPositionBiotype
ENSMUSG00000074165 (Zfp788)
zinc finger protein 788 		ENSMUST00000045720 (Zfp788-003) 41633564-41650931 protein_coding
ENSMUST00000098508 (Zfp788-001) 41633577-41651534 protein_coding
ENSMUST00000100275 (Zfp788-002) 41633531-41650878 protein_coding
ENSMUST00000131180 (Zfp788-006) 41633556-41648358 protein_coding
ENSMUST00000140964 (Zfp788-004) 41633558-41648997 protein_coding
ENSMUST00000154942 (Zfp788-005) 41633203-41647548 protein_coding
ENSMUST00000170770 (Zfp788-201) 41647584-41650596 protein_coding
ENSMUSG00000091474 (2610021A01Rik)
RIKEN cDNA 2610021A01 gene 		ENSMUST00000163475 (2610021A01Rik-001) 41599261-41628533 protein_coding

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004WQ_0001ENSDARG00000090420ENSDART00000122771ENSDARG00000091491ENSDART00000128015CIL_0004WQ_0002ENSG00000196267ENST00000322146ENST00000596428ENST00000597065ENST00000597252ENST00000599618ENST00000602187ENSG00000204611ENST00000330123ENST00000596290ENST00000597013ENST00000600228ENST00000600282ENSG00000243680ENST00000492641ENSG00000267927ENST00000599775ENSG00000268458ENST00000597886CIL_0004WQ_0003ENSMUSG00000045519ENSMUST00000068079ENSMUST00000143992ENSMUSG00000063108ENSMUST00000075263ENSMUST00000098970ENSMUST00000159569ENSMUST00000160370ENSMUST00000161248ENSMUST00000162438CIL_0004WQ_0004ENSMUSG00000058402ENSMUST00000057652ENSMUST00000074876ENSMUST00000130272ENSMUST00000145952ENSMUST00000148489ENSMUSG00000062040ENSMUST00000053521ENSMUST00000159920ENSMUST00000160411ENSMUST00000161904ENSMUST00000162592ENSMUST00000172448CIL_0004WQ_0005ENSMUSG00000072762ENSMUST00000100937ENSMUST00000112547ENSMUSG00000072763ENSMUST00000092720CIL_0004WQ_0006ENSMUSG00000074165ENSMUST00000045720ENSMUST00000098508ENSMUST00000100275ENSMUST00000131180ENSMUST00000140964ENSMUST00000154942ENSMUST00000170770ENSMUSG00000091474ENSMUST00000163475
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004WQ_0001ENSDARG00000090420ENSDART00000122771ENSDARG00000091491ENSDART00000128015CIL_0004WQ_0002ENSG00000196267ENST00000322146ENST00000597065ENST00000597252ENSG00000204611ENST00000330123ENST00000596290ENST00000597013ENST00000600228ENSG00000243680ENST00000492641ENSG00000267927ENST00000599775ENSG00000268458ENST00000597886CIL_0004WQ_0003ENSMUSG00000045519ENSMUST00000068079ENSMUST00000143992ENSMUSG00000063108ENSMUST00000075263ENSMUST00000098970ENSMUST00000159569ENSMUST00000160370ENSMUST00000161248ENSMUST00000162438CIL_0004WQ_0004ENSMUSG00000058402ENSMUST00000057652ENSMUST00000074876ENSMUST00000130272ENSMUST00000145952ENSMUSG00000062040ENSMUST00000053521ENSMUST00000159920ENSMUST00000161904ENSMUST00000162592ENSMUST00000172448CIL_0004WQ_0005ENSMUSG00000072762ENSMUST00000100937ENSMUST00000112547ENSMUSG00000072763ENSMUST00000092720CIL_0004WQ_0006ENSMUSG00000074165ENSMUST00000045720ENSMUST00000098508ENSMUST00000100275ENSMUST00000131180ENSMUST00000140964ENSMUST00000154942ENSMUST00000170770ENSMUSG00000091474ENSMUST00000163475
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000090420 ENSDART00000122771 N/A N/A N/A 0.200±0.16 N/A N/A 0.056±0.04 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091491 ENSDART00000128015 N/A N/A N/A 0.267±0.01 N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196267 ENST00000322146 N/A N/A 0.677±0.00 N/A 0.604±0.02 0.951±0.57 0.333±0.00 1.110±0.00 1.158±0.90 N/A N/A 0.636±0.00 0.623±0.00 0.616±0.00
ENST00000596428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597065 N/A N/A N/A 2.268±0.00 3.321±0.00 N/A N/A N/A N/A 5.379±0.00 1.076±0.00 N/A N/A N/A
ENST00000597252 N/A 1.218±0.00 N/A N/A 1.174±0.00 0.987±0.00 N/A N/A N/A 1.851±0.90 N/A N/A N/A N/A
ENST00000599618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204611 ENST00000330123 0.743±0.00 N/A 0.479±0.00 0.453±0.00 1.484±0.00 1.023±0.43 N/A 0.848±0.00 1.201±0.00 1.954±0.00 0.138±0.11 0.367±0.00 0.451±0.11 0.495±0.00
ENST00000596290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A
ENST00000597013 N/A N/A 1.539±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600228 0.960±0.00 0.451±0.00 0.237±0.00 0.451±0.20 0.599±0.08 0.810±0.20 0.435±0.01 1.114±0.33 1.083±0.00 1.481±0.00 0.219±0.00 1.099±1.01 0.534±0.24 0.839±0.19
ENST00000600282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243680 ENST00000492641 0.296±0.00 0.559±0.00 N/A 0.065±0.00 0.375±0.00 0.831±0.24 N/A N/A 0.221±0.00 0.358±0.00 0.610±0.00 0.956±0.77 N/A 0.111±0.00
ENSG00000267927 ENST00000599775 0.886±0.00 2.649±0.00 0.144±0.00 1.499±0.00 2.793±0.00 0.653±0.00 0.804±0.00 1.023±0.00 0.762±0.00 1.446±0.00 1.346±0.00 0.333±0.09 0.090±0.00 0.774±0.30
ENSG00000268458 ENST00000597886 0.107±0.00 0.036±0.00 N/A 0.108±0.00 0.134±0.00 0.064±0.00 N/A N/A N/A 0.030±0.00 N/A 0.395±0.29 N/A 0.032±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045519 ENSMUST00000068079 0.639±0.14 0.536±0.14 1.430±0.19 2.229±1.37 0.730±0.10 0.579±0.08 0.357±0.08 0.652±0.10 0.380±0.12 0.570±0.17 0.295±0.06 1.419±0.53 0.487±0.20 0.245±0.09
ENSMUST00000143992 3.099±0.47 1.633±0.56 8.597±1.39 4.450±2.66 2.088±1.11 0.866±0.52 4.473±0.56 4.455±0.96 2.789±0.95 2.731±0.52 7.441±0.80 4.159±0.64 3.170±1.20 12.613±3.80
ENSMUSG00000063108 ENSMUST00000075263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.214±0.00
ENSMUST00000098970 N/A 0.400±0.15 N/A N/A N/A 0.220±0.00 N/A N/A 0.212±0.00 N/A N/A 0.863±0.00 N/A 0.130±0.00
ENSMUST00000159569 1.276±0.38 0.583±0.14 1.983±0.04 7.096±2.67 0.841±0.44 1.081±0.35 0.577±0.13 0.733±0.41 1.159±0.70 1.578±0.86 0.743±0.09 1.733±0.45 0.815±0.07 0.947±0.41
ENSMUST00000160370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.260±0.00
ENSMUST00000161248 N/A N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A 0.706±0.00 N/A N/A
ENSMUST00000162438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.808±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000058402 ENSMUST00000057652 0.388±0.28 0.210±0.16 0.365±0.01 1.279±0.00 0.604±0.43 0.422±0.08 N/A 0.231±0.00 0.179±0.07 0.389±0.03 0.285±0.06 0.862±0.40 0.302±0.16 0.050±0.00
ENSMUST00000074876 0.503±0.28 0.296±0.16 0.624±0.13 1.385±0.31 0.483±0.18 0.190±0.07 0.160±0.06 0.369±0.16 0.173±0.06 0.568±0.23 0.274±0.03 0.763±0.13 0.175±0.00 0.240±0.02
ENSMUST00000130272 N/A 0.837±0.28 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.901±0.00 0.303±0.06
ENSMUST00000145952 N/A 0.225±0.05 1.325±0.00 1.417±1.06 0.383±0.02 0.164±0.04 N/A N/A 0.144±0.06 0.182±0.04 0.434±0.16 0.323±0.18 0.083±0.00 0.080±0.03
ENSMUST00000148489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062040 ENSMUST00000053521 1.357±0.37 0.795±0.27 0.990±0.46 2.247±1.03 0.947±0.39 0.642±0.05 1.670±0.27 0.920±0.15 0.653±0.26 0.915±0.16 1.245±0.52 1.479±0.41 1.213±0.64 0.622±0.20
ENSMUST00000159920 0.275±0.00 0.305±0.00 N/A 1.115±0.00 0.223±0.06 N/A N/A N/A 0.189±0.03 0.245±0.00 N/A 0.356±0.10 N/A N/A
ENSMUST00000160411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161904 N/A N/A N/A 0.963±0.09 N/A N/A N/A N/A 0.216±0.03 N/A N/A 0.534±0.00 0.351±0.00 0.088±0.00
ENSMUST00000162592 0.840±0.19 0.232±0.09 0.485±0.11 1.547±0.31 0.253±0.09 0.184±0.01 0.315±0.03 0.253±0.07 0.238±0.11 0.336±0.12 0.473±0.11 0.648±0.32 0.372±0.08 0.144±0.05
ENSMUST00000172448 N/A 0.285±0.00 0.595±0.00 1.490±0.00 0.196±0.00 0.522±0.21 N/A 0.341±0.05 0.382±0.13 N/A 0.727±0.20 1.087±0.65 0.940±0.19 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000072762 ENSMUST00000100937 0.928±0.25 0.850±0.31 2.554±0.84 0.817±0.12 1.181±0.86 0.554±0.14 0.599±0.36 0.450±0.20 1.172±0.93 0.660±0.37 0.996±0.29 0.832±0.29 1.774±0.53 0.467±0.12
ENSMUST00000112547 0.261±0.06 N/A N/A 0.277±0.00 0.287±0.08 0.299±0.10 0.111±0.03 0.181±0.12 0.239±0.20 0.463±0.17 0.152±0.05 1.532±1.75 1.309±0.78 0.201±0.11
ENSMUSG00000072763 ENSMUST00000092720 0.356±0.15 0.129±0.06 1.001±0.17 0.233±0.08 0.221±0.06 0.168±0.08 0.097±0.05 0.245±0.04 0.224±0.08 0.252±0.04 0.125±0.04 0.680±0.39 0.495±0.19 0.056±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000074165 ENSMUST00000045720 0.439±0.00 0.223±0.12 1.169±0.08 2.256±0.02 0.222±0.02 0.147±0.00 N/A N/A 0.482±0.18 0.317±0.00 0.574±0.09 0.160±0.00 0.385±0.16 0.195±0.04
ENSMUST00000098508 0.484±0.07 0.373±0.15 N/A 1.544±0.04 0.253±0.00 0.275±0.15 0.419±0.00 0.385±0.17 0.197±0.12 0.264±0.07 0.470±0.15 0.327±0.15 0.076±0.00 0.183±0.03
ENSMUST00000100275 N/A 0.088±0.00 0.935±0.19 N/A 0.439±0.00 0.220±0.01 0.117±0.02 N/A 0.243±0.14 0.633±0.02 0.952±0.36 0.520±0.00 0.269±0.16 0.415±0.17
ENSMUST00000131180 N/A 0.281±0.14 N/A 6.369±0.00 0.312±0.12 0.251±0.00 N/A N/A 0.122±0.00 N/A N/A 0.964±1.09 1.020±0.29 1.860±1.21
ENSMUST00000140964 N/A N/A N/A N/A 0.844±0.00 0.247±0.06 N/A N/A 0.178±0.05 N/A N/A 0.860±0.62 0.340±0.08 N/A
ENSMUST00000154942 N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A 0.211±0.11 N/A N/A 0.319±0.03 N/A N/A
ENSMUST00000170770 N/A 0.490±0.00 1.097±0.04 N/A N/A 0.353±0.07 0.193±0.05 N/A 0.252±0.03 N/A 0.541±0.00 2.158±1.21 0.709±0.27 0.398±0.17
ENSMUSG00000091474 ENSMUST00000163475 1.086±0.37 0.806±0.29 2.029±0.50 3.581±1.43 1.241±0.25 0.846±0.24 0.508±0.16 0.800±0.13 1.199±0.63 1.001±0.22 1.124±0.11 1.151±0.81 1.206±0.62 1.042±0.39

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