C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc and ring finger 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058446 Znrf2 10090 + 6:54816916-54893500 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079869 Znrf2-001 54816916-54893500 protein_coding
  ENSMUST00000127331 Znrf2-003 54817448-54885111 protein_coding
  ENSMUST00000148425 Znrf2-002 54817270-54878421 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079869ENSMUST00000127331ENSMUST00000148425
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079869 8.696±1.79 24.203±6.71 4.106±0.22 4.373±3.45 12.001±3.64 10.665±2.23 3.562±0.34 9.184±3.41 6.574±3.42 5.903±2.49 5.454±0.89 10.968±3.66 4.280±2.06 7.926±2.64
ENSMUST00000127331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.955±0.00 11.126±0.00
ENSMUST00000148425 N/A 54.948±19.77 N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.053±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006I3 CIL_0006I3_0003 CGP 6:54816916-54972612

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISO ubiquitin-protein transferase activity
GO:0005737 ISO cytoplasm
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0005886 ISO plasma membrane
GO:0008270 IEA zinc ion binding
GO:0016567 ISO:IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0030659 ISO cytoplasmic vesicle membrane
GO:0043234 ISO protein complex
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078486 znrf2b zinc and ring finger 2b protein_coding Danio_rerio
ENSG00000180233 ZNRF2 zinc and ring finger 2 protein_coding Homo_sapiens

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