C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006I3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078486-ENSDARG00000036308 CGP 7955 16:57233389-57304363
GeneTranscriptPositionBiotype
ENSDARG00000036308 (nod1)
nucleotide-binding oligomerization domain containing 1 		ENSDART00000052749 (nod1-201) 57289608-57304076 protein_coding
ENSDART00000155929 (nod1-001) 57290010-57304363 protein_coding
ENSDARG00000078486 (znrf2b)
zinc and ring finger 2b 		ENSDART00000111286 (znrf2b-201) 57233389-57276376 protein_coding
CIL_0006I3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180233-ENSG00000106100 CGP 9606 7:30284307-30478784
GeneTranscriptPositionBiotype
ENSG00000106100 (NOD1)
nucleotide-binding oligomerization domain containing 1 		ENST00000222823 (NOD1-001) 30424527-30478780 protein_coding
ENST00000411552 (NOD1-004) 30456743-30478728 protein_coding
ENST00000413433 (NOD1-006) 30456743-30478636 protein_coding
ENST00000419601 (NOD1-007) 30456785-30478784 protein_coding
ENST00000419799 (NOD1-005) 30456743-30478742 protein_coding
ENST00000434755 (NOD1-002) 30424530-30478738 nonsense_mediated_decay
ENST00000467706 (NOD1-008) 30425209-30433414 retained_intron
ENST00000489614 (NOD1-003) 30424534-30447977 retained_intron
ENSG00000180233 (ZNRF2)
zinc and ring finger 2 		ENST00000323037 (ZNRF2-001) 30284307-30367692 protein_coding
ENST00000414621 (ZNRF2-004) 30390908-30412375 processed_transcript
ENST00000442800 (ZNRF2-003) 30362400-30412502 nonsense_mediated_decay
ENST00000459998 (ZNRF2-002) 30285574-30288993 processed_transcript
ENSG00000207771 (MIR550A1)
microRNA 550a-1 		ENST00000385037 (MIR550A1-201) 30289794-30289890 miRNA
ENSG00000235859 (DKFZP586I1420)
uncharacterized protein DKFZp586I1420 		ENST00000496846 (DKFZP586I1420-001) 30371508-30372741 processed_pseudogene
ENSG00000272638 (GS1-114I9.1)
 ENST00000608195 (GS1-114I9.1-001) 30424672-30425412 antisense
CIL_0006I3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058446-ENSMUSG00000038058 CGP 10090 6:54816916-54972612
GeneTranscriptPositionBiotype
ENSMUSG00000038058 (Nod1)
nucleotide-binding oligomerization domain containing 1 		ENSMUST00000060655 (Nod1-201) 54923942-54972612 protein_coding
ENSMUST00000168172 (Nod1-202) 54923942-54971661 protein_coding
ENSMUSG00000058446 (Znrf2)
zinc and ring finger 2 		ENSMUST00000079869 (Znrf2-001) 54816916-54893500 protein_coding
ENSMUST00000127331 (Znrf2-003) 54817448-54885111 protein_coding
ENSMUST00000148425 (Znrf2-002) 54817270-54878421 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006I3_0001ENSDARG00000036308ENSDART00000052749ENSDART00000155929ENSDARG00000078486ENSDART00000111286CIL_0006I3_0002ENSG00000106100ENST00000222823ENST00000411552ENST00000413433ENST00000419601ENST00000419799ENST00000434755ENST00000467706ENST00000489614ENSG00000180233ENST00000323037ENST00000414621ENST00000442800ENST00000459998ENSG00000207771ENST00000385037ENSG00000235859ENST00000496846ENSG00000272638ENST00000608195CIL_0006I3_0003ENSMUSG00000038058ENSMUST00000060655ENSMUST00000168172ENSMUSG00000058446ENSMUST00000079869ENSMUST00000127331ENSMUST00000148425
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006I3_0001ENSDARG00000036308ENSDART00000052749ENSDART00000155929ENSDARG00000078486ENSDART00000111286CIL_0006I3_0002ENSG00000106100ENST00000222823ENST00000419601ENST00000419799ENST00000434755ENST00000467706ENST00000489614ENSG00000180233ENST00000323037ENST00000442800ENSG00000207771ENST00000385037ENSG00000235859ENST00000496846ENSG00000272638ENST00000608195CIL_0006I3_0003ENSMUSG00000038058ENSMUST00000060655ENSMUST00000168172ENSMUSG00000058446ENSMUST00000079869ENSMUST00000127331ENSMUST00000148425
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036308 ENSDART00000052749 N/A N/A N/A 0.141±0.00 N/A N/A 0.148±0.00 N/A 0.075±0.00 N/A 0.051±0.00 N/A N/A N/A
ENSDART00000155929 N/A N/A N/A 0.392±0.00 N/A N/A 0.868±0.54 N/A 0.063±0.00 N/A N/A N/A N/A N/A
ENSDARG00000078486 ENSDART00000111286 N/A N/A N/A 17.641±12.65 N/A N/A 15.466±10.19 77.942±0.00 6.479±0.00 N/A 6.202±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106100 ENST00000222823 5.766±0.00 2.402±0.00 0.353±0.00 0.298±0.17 1.175±0.57 1.168±0.74 N/A 1.187±0.00 0.463±0.10 2.710±0.96 0.373±0.00 1.674±1.52 2.008±0.73 0.851±0.51
ENST00000411552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419601 N/A N/A N/A 0.775±0.00 N/A N/A N/A N/A 1.660±0.00 N/A N/A 3.211±0.00 N/A N/A
ENST00000419799 N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A N/A N/A N/A N/A
ENST00000434755 N/A N/A N/A N/A N/A 1.316±0.00 N/A N/A N/A 0.932±0.00 N/A N/A N/A N/A
ENST00000467706 N/A N/A N/A N/A 2.003±0.00 1.525±0.00 1.409±0.00 N/A N/A N/A 2.101±0.00 N/A N/A 0.751±0.00
ENST00000489614 N/A N/A N/A 0.212±0.00 0.611±0.00 N/A 0.343±0.00 N/A N/A 1.339±0.00 N/A N/A N/A N/A
ENSG00000180233 ENST00000323037 3.715±0.00 1.648±0.00 6.235±0.00 2.234±0.79 6.000±2.80 8.999±4.02 1.286±0.52 9.045±0.19 5.539±0.48 2.675±0.12 1.476±1.20 3.153±2.11 4.361±2.49 24.521±11.80
ENST00000414621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.792±0.00 7.332±0.00 71.294±0.00
ENST00000459998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207771 ENST00000385037 N/A 0.798±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235859 ENST00000496846 1.007±0.00 5.951±0.00 3.649±0.00 1.188±0.00 1.623±0.00 N/A 1.680±0.00 0.929±0.00 1.240±0.00 2.831±0.63 1.141±0.53 2.900±0.37 2.842±1.79 3.535±0.67
ENSG00000272638 ENST00000608195 N/A N/A 0.753±0.00 N/A 2.203±0.00 4.666±3.38 3.141±0.00 3.766±3.29 0.907±0.08 N/A 0.594±0.00 3.426±1.70 2.735±0.00 3.489±1.95
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038058 ENSMUST00000060655 16.847±3.39 11.047±1.35 7.690±0.33 0.671±0.24 23.270±3.40 9.164±2.86 8.027±0.51 5.832±0.74 2.464±0.84 31.810±4.22 3.375±0.35 11.200±6.46 1.381±0.85 0.335±0.15
ENSMUST00000168172 4.765±0.00 N/A N/A 0.350±0.00 2.779±0.00 N/A N/A N/A 0.333±0.00 N/A N/A 3.448±1.17 N/A 0.111±0.00
ENSMUSG00000058446 ENSMUST00000079869 8.696±1.79 24.203±6.71 4.106±0.22 4.373±3.45 12.001±3.64 10.665±2.23 3.562±0.34 9.184±3.41 6.574±3.42 5.903±2.49 5.454±0.89 10.968±3.66 4.280±2.06 7.926±2.64
ENSMUST00000127331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.955±0.00 11.126±0.00
ENSMUST00000148425 N/A 54.948±19.77 N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.053±0.00 N/A N/A

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