C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059291 Rpl11 10090 - 4:136028265-136053428 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102536 Rpl11-001 136049731-136053393 protein_coding
  ENSMUST00000125726 Rpl11-003 136049990-136052996 processed_transcript
  ENSMUST00000128733 Rpl11-005 136051241-136053428 processed_transcript
  ENSMUST00000133613 Rpl11-008 136049947-136050526 processed_transcript
  ENSMUST00000137580 Rpl11-009 136028265-136052685 processed_transcript
  ENSMUST00000142440 Rpl11-007 136050633-136052706 processed_transcript
  ENSMUST00000147059 Rpl11-004 136050332-136052754 processed_transcript
  ENSMUST00000150565 Rpl11-006 136051028-136052716 processed_transcript
  ENSMUST00000153223 Rpl11-010 136028265-136028798 processed_transcript
  ENSMUST00000155873 Rpl11-002 136050280-136053090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102536ENSMUST00000125726ENSMUST00000128733ENSMUST00000147059ENSMUST00000150565ENSMUST00000155873
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102536 117.685±37.64 75.515±13.00 111.403±13.19 114.892±74.15 108.335±39.81 167.629±45.97 43.308±7.64 118.498±26.31 142.400±77.19 101.288±37.14 36.162±8.14 201.493±58.91 130.315±80.39 63.104±27.87
ENSMUST00000125726 N/A N/A N/A 7.832±0.00 9.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 87.795±5.67 N/A N/A
ENSMUST00000147059 N/A N/A N/A 15.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 135.195±0.00 42.832±0.00
ENSMUST00000150565 N/A 48.880±5.01 N/A N/A 36.799±3.66 53.510±5.59 N/A N/A N/A N/A N/A 51.459±0.00 N/A N/A
ENSMUST00000155873 69.818±9.93 25.254±0.00 66.754±0.00 147.408±66.02 50.038±9.01 N/A 56.115±2.78 96.412±16.47 132.149±128.71 35.483±12.31 53.762±16.73 405.692±105.54 225.434±116.83 63.726±19.47

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005840 IEA ribosome
GO:0006364 IEA rRNA processing
GO:0006412 IEA translation
GO:0006605 IEA protein targeting
GO:0016020 IEA membrane
GO:0019843 IEA rRNA binding
GO:0022625 IEA cytosolic large ribosomal subunit
GO:0034504 IMP protein localization to nucleus
GO:0042273 IEA ribosomal large subunit biogenesis
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043509 rpl11 ribosomal protein L11 protein_coding Danio_rerio
ENSG00000142676 RPL11 ribosomal protein L11 protein_coding Homo_sapiens

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