C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102536 Rpl11-001 ENSMUSG00000059291 10090 - 4:136049731-136053393 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102536
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102536 117.685±37.64 75.515±13.00 111.403±13.19 114.892±74.15 108.335±39.81 167.629±45.97 43.308±7.64 118.498±26.31 142.400±77.19 101.288±37.14 36.162±8.14 201.493±58.91 130.315±80.39 63.104±27.87

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005840 IEA ribosome
GO:0006364 IEA rRNA processing
GO:0006412 IEA translation
GO:0006605 IEA protein targeting
GO:0016020 IEA membrane
GO:0019843 IEA rRNA binding
GO:0022625 IEA cytosolic large ribosomal subunit
GO:0034504 IMP protein localization to nucleus
GO:0042273 IEA ribosomal large subunit biogenesis
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000063870 rpl11-201 protein_coding Danio_rerio 0 462
ENSDART00000075902 CABZ01086825.1-201 protein_coding Danio_rerio 5e-20 102
ENST00000374550 RPL11-001 protein_coding Homo_sapiens 0 784
ENST00000395256 RP11-380G5.3-001 processed_pseudogene Homo_sapiens 0 473
ENST00000443624 RPL11-004 protein_coding Homo_sapiens 0 508
ENST00000458455 RPL11-005 protein_coding Homo_sapiens 0 693
ENST00000467075 RPL11-002 processed_transcript Homo_sapiens 0 206
ENST00000482370 RPL11-003 processed_transcript Homo_sapiens 0 736

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