C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 5868
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060204 Gm5868 10090 - 5:72581639-72587550 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031124 Gm5868-001 72581639-72587550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000031124
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000031124 0.085±0.05 0.102±0.00 0.330±0.00 0.654±0.44 0.087±0.00 0.135±0.09 0.010±0.01 0.055±0.00 0.909±0.62 0.066±0.03 0.048±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RD CIL_0008RD_0002 VISTA 5:72193972-72795406
CIL_00032J CIL_00032J_0002 CGP 5:72577114-72587550

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006814 IEA sodium ion transport
GO:0008150 ND biological_process
GO:0008508 IEA bile acid:sodium symporter activity
GO:0015721 IEA bile acid and bile salt transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009131 slc10a4 solute carrier family 10 (sodium/bile acid cotransporter family), member 4 protein_coding Danio_rerio
ENSG00000145248 SLC10A4 solute carrier family 10, member 4 protein_coding Homo_sapiens

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