C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peptidyl prolyl isomerase H
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060288 Ppih 10090 - 4:119300010-119320546 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056458 Ppih-004 119300010-119320484 protein_coding
  ENSMUST00000106317 Ppih-002 119311314-119320499 protein_coding
  ENSMUST00000106318 Ppih-001 119300010-119320546 protein_coding
  ENSMUST00000106319 Ppih-005 119300010-119320497 protein_coding
  ENSMUST00000106321 Ppih-003 119307160-119320484 protein_coding
  ENSMUST00000147077 Ppih-006 119306585-119320417 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056458ENSMUST00000106317ENSMUST00000106318ENSMUST00000106319ENSMUST00000106321
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056458 3.343±0.00 0.290±0.00 2.401±0.00 5.614±1.09 2.065±1.08 2.298±1.20 N/A 1.253±0.27 7.991±5.69 0.923±0.00 0.911±0.38 3.255±2.48 7.846±2.65 4.189±0.76
ENSMUST00000106317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.264±0.00
ENSMUST00000106318 3.243±1.12 1.348±0.44 8.549±2.07 18.632±11.03 3.943±2.23 1.528±0.90 2.180±0.22 3.229±0.34 16.949±17.12 1.253±0.49 3.582±0.64 5.942±5.58 21.296±11.88 10.719±4.16
ENSMUST00000106319 N/A N/A N/A N/A N/A 2.090±0.00 N/A N/A 0.742±0.00 N/A 0.564±0.00 1.625±0.09 18.083±13.98 N/A
ENSMUST00000106321 1.976±0.01 0.815±0.48 2.445±0.00 2.079±0.69 1.653±0.49 1.584±0.34 0.933±0.15 1.723±0.24 2.549±2.14 0.853±0.37 0.461±0.10 2.084±1.04 4.846±2.57 1.255±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0002 VISTA 4:118719151-119320076
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197
CIL_0002SI CIL_0002SI_0002 CGP 4:119277981-119320546

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0005515 IEA protein binding
GO:0005681 IEA spliceosomal complex
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0006457 IEA protein folding
GO:0008380 IEA RNA splicing
GO:0016607 IEA nuclear speck
GO:0043021 IEA ribonucleoprotein complex binding
GO:0045070 IEA positive regulation of viral genome replication
GO:0046540 IEA U4/U6 x U5 tri-snRNP complex
GO:0071001 IEA U4/U6 snRNP

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041530 ppih peptidylprolyl isomerase H (cyclophilin H) protein_coding Danio_rerio
ENSG00000171960 PPIH peptidylprolyl isomerase H (cyclophilin H) protein_coding Homo_sapiens

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