C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002SI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004757-ENSDARG00000041530 CGP 7955 8:49299968-49362538
GeneTranscriptPositionBiotype
ENSDARG00000004757 (ybx1)
Y box binding protein 1
ENSDART00000024320 (ybx1-001) 49299968-49308225 protein_coding
ENSDART00000110512 (ybx1-201) 49299970-49308162 protein_coding
ENSDART00000126513 (ybx1-003) 49305105-49308158 retained_intron
ENSDART00000128057 (ybx1-002) 49303503-49308162 retained_intron
ENSDARG00000041530 (ppih)
peptidylprolyl isomerase H (cyclophilin H)
ENSDART00000060877 (ppih-001) 49315123-49362538 protein_coding
ENSDART00000060880 (ppih-201) 49315585-49362538 protein_coding
ENSDART00000060883 (ppih-002) 49308843-49362301 protein_coding
ENSDART00000147606 (ppih-003) 49315391-49362253 protein_coding
ENSDARG00000092141 (si:dkeyp-100a1.6)
si:dkeyp-100a1.6
ENSDART00000137319 (si:dkeyp-100a1.6-001) 49344293-49354011 protein_coding
ENSDARG00000097853 (si:dkeyp-100a1.7)
si:dkeyp-100a1.7
ENSDART00000156735 (si:dkeyp-100a1.7-001) 49310801-49315172 antisense
CIL_0002SI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028639-ENSMUSG00000060288 CGP 10090 4:119277981-119320546
GeneTranscriptPositionBiotype
ENSMUSG00000028639 (Ybx1)
Y box protein 1
ENSMUST00000079644 (Ybx1-001) 119277981-119294604 protein_coding
ENSMUST00000127737 (Ybx1-004) 119277990-119282792 protein_coding
ENSMUST00000139897 (Ybx1-003) 119282273-119294490 processed_transcript
ENSMUST00000142884 (Ybx1-005) 119285002-119294480 processed_transcript
ENSMUST00000144992 (Ybx1-006) 119281143-119282186 processed_transcript
ENSMUST00000145976 (Ybx1-007) 119278167-119279450 processed_transcript
ENSMUST00000152733 (Ybx1-002) 119293624-119294500 processed_transcript
ENSMUSG00000060288 (Ppih)
peptidyl prolyl isomerase H
ENSMUST00000056458 (Ppih-004) 119300010-119320484 protein_coding
ENSMUST00000106317 (Ppih-002) 119311314-119320499 protein_coding
ENSMUST00000106318 (Ppih-001) 119300010-119320546 protein_coding
ENSMUST00000106319 (Ppih-005) 119300010-119320497 protein_coding
ENSMUST00000106321 (Ppih-003) 119307160-119320484 protein_coding
ENSMUST00000147077 (Ppih-006) 119306585-119320417 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SI_0001ENSDARG00000004757ENSDART00000024320ENSDART00000110512ENSDART00000126513ENSDART00000128057ENSDARG00000041530ENSDART00000060877ENSDART00000060880ENSDART00000060883ENSDART00000147606ENSDARG00000092141ENSDART00000137319ENSDARG00000097853ENSDART00000156735CIL_0002SI_0002ENSMUSG00000028639ENSMUST00000079644ENSMUST00000127737ENSMUST00000139897ENSMUST00000142884ENSMUST00000144992ENSMUST00000145976ENSMUST00000152733ENSMUSG00000060288ENSMUST00000056458ENSMUST00000106317ENSMUST00000106318ENSMUST00000106319ENSMUST00000106321ENSMUST00000147077
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SI_0001ENSDARG00000004757ENSDART00000024320ENSDART00000110512ENSDARG00000041530ENSDART00000060877ENSDART00000060880ENSDART00000060883ENSDARG00000092141ENSDART00000137319ENSDARG00000097853ENSDART00000156735CIL_0002SI_0002ENSMUSG00000028639ENSMUST00000079644ENSMUST00000127737ENSMUST00000139897ENSMUST00000145976ENSMUST00000152733ENSMUSG00000060288ENSMUST00000056458ENSMUST00000106317ENSMUST00000106318ENSMUST00000106319ENSMUST00000106321
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004757 ENSDART00000024320 N/A N/A N/A 60.335±30.59 N/A N/A 462.570±250.66 71.208±0.00 111.758±0.00 N/A 640.423±0.00 N/A N/A N/A
ENSDART00000110512 N/A N/A N/A 268.129±12.41 N/A N/A 2254.495±884.98 1652.445±487.37 N/A N/A N/A N/A N/A N/A
ENSDART00000126513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000128057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000041530 ENSDART00000060877 N/A N/A N/A 5.729±3.29 N/A N/A 4.836±1.19 10.070±2.17 0.313±0.00 N/A 1.021±0.00 N/A N/A N/A
ENSDART00000060880 N/A N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A 0.492±0.00 N/A N/A N/A
ENSDART00000060883 N/A N/A N/A 0.249±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092141 ENSDART00000137319 N/A N/A N/A 0.973±0.00 N/A N/A 0.142±0.00 0.123±0.00 N/A N/A 0.172±0.00 N/A N/A N/A
ENSDARG00000097853 ENSDART00000156735 N/A N/A N/A 0.239±0.00 N/A N/A N/A 0.374±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028639 ENSMUST00000079644 89.224±10.94 27.874±3.60 108.886±17.62 193.854±106.00 64.752±11.96 86.281±9.66 144.720±4.68 112.674±12.44 90.349±80.09 94.982±10.40 295.840±7.64 173.750±114.71 164.114±91.93 306.173±213.87
ENSMUST00000127737 N/A N/A N/A N/A N/A N/A N/A 25.500±0.00 9.935±1.50 N/A N/A 71.137±0.00 44.317±27.25 118.222±16.52
ENSMUST00000139897 N/A 52.291±9.34 N/A N/A N/A N/A N/A N/A N/A N/A N/A 66.831±21.88 N/A N/A
ENSMUST00000142884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145976 N/A N/A N/A 107.571±0.00 N/A N/A N/A N/A N/A N/A N/A 377.114±0.00 228.881±93.99 330.518±0.00
ENSMUST00000152733 N/A 13.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060288 ENSMUST00000056458 3.343±0.00 0.290±0.00 2.401±0.00 5.614±1.09 2.065±1.08 2.298±1.20 N/A 1.253±0.27 7.991±5.69 0.923±0.00 0.911±0.38 3.255±2.48 7.846±2.65 4.189±0.76
ENSMUST00000106317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.264±0.00
ENSMUST00000106318 3.243±1.12 1.348±0.44 8.549±2.07 18.632±11.03 3.943±2.23 1.528±0.90 2.180±0.22 3.229±0.34 16.949±17.12 1.253±0.49 3.582±0.64 5.942±5.58 21.296±11.88 10.719±4.16
ENSMUST00000106319 N/A N/A N/A N/A N/A 2.090±0.00 N/A N/A 0.742±0.00 N/A 0.564±0.00 1.625±0.09 18.083±13.98 N/A
ENSMUST00000106321 1.976±0.01 0.815±0.48 2.445±0.00 2.079±0.69 1.653±0.49 1.584±0.34 0.933±0.15 1.723±0.24 2.549±2.14 0.853±0.37 0.461±0.10 2.084±1.04 4.846±2.57 1.255±0.02
ENSMUST00000147077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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