C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calneuron 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060371 Caln1 10090 + 5:130369476-130840645 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086029 Caln1-002 130369476-130840174 protein_coding
  ENSMUST00000111287 Caln1-003 130448012-130840636 protein_coding
  ENSMUST00000111288 Caln1-001 130448801-130840645 protein_coding
  ENSMUST00000141131 Caln1-004 130447449-130506188 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000086029ENSMUST00000111287ENSMUST00000111288ENSMUST00000141131
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000086029 3.965±1.53 0.022±0.00 36.368±0.00 0.088±0.05 0.018±0.00 0.918±0.53 N/A 0.437±0.18 0.048±0.02 0.399±0.25
ENSMUST00000111287 N/A N/A N/A N/A 0.043±0.03 N/A N/A 0.223±0.12 N/A N/A
ENSMUST00000111288 N/A N/A N/A N/A N/A 0.007±0.00 0.024±0.01 0.120±0.00 0.004±0.00 N/A
ENSMUST00000141131 N/A N/A N/A N/A N/A N/A N/A 0.398±0.04 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 ISA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0032588 IDA trans-Golgi network membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069766 caln2 calneuron 2 protein_coding Danio_rerio
ENSDARG00000088898 CALN1 (2 of 2) calneuron 1 protein_coding Danio_rerio
ENSG00000183166 CALN1 calneuron 1 protein_coding Homo_sapiens

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