C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calneuron 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183166 CALN1 9606 - 7:71779491-72447151 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329008 CALN1-004 71779491-72336995 protein_coding
  ENST00000395275 CALN1-006 71779491-72412373 protein_coding
  ENST00000395276 CALN1-005 71779491-72447061 protein_coding
  ENST00000405452 CALN1-201 71779492-71810495 protein_coding
  ENST00000431984 CALN1-007 71787775-72447151 protein_coding
  ENST00000446128 CALN1-008 72023657-72337751 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329008ENST00000395275ENST00000395276ENST00000405452ENST00000431984ENST00000446128
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329008 N/A N/A N/A 4.821±0.18 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.588±0.27
ENST00000395276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.00
ENST00000405452 0.031±0.00 0.067±0.00 0.006±0.00 N/A 0.046±0.02 0.018±0.00 0.018±0.00 0.032±0.01 0.046±0.03 0.041±0.02 0.003±0.00 0.018±0.02 0.072±0.00 N/A
ENST00000431984 N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.849±2.07
ENST00000446128 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.003±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072U CIL_00072U_0002 CGP 7:71132169-72447151
CIL_0004XJ CIL_0004XJ_0002 CGP 7:71779491-72828198

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0032588 IDA trans-Golgi network membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069766 caln2 calneuron 2 protein_coding Danio_rerio
ENSDARG00000088898 CALN1 (2 of 2) calneuron 1 protein_coding Danio_rerio
ENSMUSG00000060371 Caln1 calneuron 1 protein_coding Mus_musculus

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