C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, Q region locus 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060550 H2-Q7 10090 + 17:35439155-35443773 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071951 H2-Q7-001 35439155-35443643 protein_coding
  ENSMUST00000076256 H2-Q7-201 35439155-35443773 protein_coding
  ENSMUST00000078205 H2-Q7-202 35439155-35443773 protein_coding
  ENSMUST00000116598 H2-Q7-203 35439155-35443773 protein_coding
  ENSMUST00000173016 H2-Q7-002 35442188-35443769 retained_intron
  ENSMUST00000173788 H2-Q7-003 35439207-35443769 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071951ENSMUST00000076256ENSMUST00000078205ENSMUST00000116598ENSMUST00000173016ENSMUST00000173788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071951 N/A N/A N/A N/A N/A 4.970±0.42 N/A N/A 9.321±7.81 N/A N/A 7.080±0.00 1.527±0.29 0.270±0.18
ENSMUST00000076256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.021±0.00 N/A N/A
ENSMUST00000078205 N/A 4.878±0.00 N/A N/A N/A N/A N/A N/A 2.481±0.00 N/A N/A N/A N/A N/A
ENSMUST00000116598 53.509±17.11 10.697±3.47 17.565±1.58 0.675±0.31 116.628±13.51 11.450±2.48 10.712±7.45 38.634±3.60 20.018±15.52 94.532±34.84 2.290±1.85 17.542±8.70 3.794±2.06 1.319±0.74
ENSMUST00000173016 N/A 9.579±1.51 N/A N/A 59.062±5.89 5.918±0.16 2.285±0.21 N/A N/A N/A 0.673±0.00 N/A N/A N/A
ENSMUST00000173788 24.882±9.88 8.676±1.26 8.990±1.62 1.559±1.78 65.600±18.12 5.957±1.18 7.687±4.09 9.125±1.43 5.376±4.13 40.124±16.84 1.762±1.63 7.485±3.06 0.853±0.54 0.369±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0006955 IEA immune response
GO:0016021 IEA integral component of membrane
GO:0030670 TAS phagocytic vesicle membrane
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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