C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility 2, Q region locus 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116598 H2-Q7-203 ENSMUSG00000060550 10090 + 17:35439155-35443773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116598
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116598 53.509±17.11 10.697±3.47 17.565±1.58 0.675±0.31 116.628±13.51 11.450±2.48 10.712±7.45 38.634±3.60 20.018±15.52 94.532±34.84 2.290±1.85 17.542±8.70 3.794±2.06 1.319±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0006955 IEA immune response
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360323 HLA-G-001 protein_coding Homo_sapiens 0 405
ENST00000376228 HLA-C-001 protein_coding Homo_sapiens 0 453
ENST00000376237 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000376802 HLA-A-003 protein_coding Homo_sapiens 0 442
ENST00000376806 HLA-A-002 protein_coding Homo_sapiens 0 442
ENST00000376809 HLA-A-201 protein_coding Homo_sapiens 0 442
ENST00000376815 HLA-G-006 protein_coding Homo_sapiens 0 235
ENST00000376818 HLA-G-004 protein_coding Homo_sapiens 0 235
ENST00000376822 HLA-A-003 protein_coding Homo_sapiens 0 448
ENST00000376828 HLA-G-002 protein_coding Homo_sapiens 0 405
ENST00000383323 HLA-C-003 protein_coding Homo_sapiens 0 444
ENST00000383329 HLA-C-002 protein_coding Homo_sapiens 0 453
ENST00000383483 HLA-C-004 protein_coding Homo_sapiens 0 444
ENST00000383487 HLA-C-003 protein_coding Homo_sapiens 0 444
ENST00000383605 HLA-A-001 protein_coding Homo_sapiens 0 448
ENST00000383619 HLA-A-002 protein_coding Homo_sapiens 0 448
ENST00000383621 HLA-G-001 protein_coding Homo_sapiens 0 394
ENST00000383622 HLA-G-006 protein_coding Homo_sapiens 0 230
ENST00000383623 HLA-G-004 protein_coding Homo_sapiens 0 230
ENST00000396634 HLA-A-001 protein_coding Homo_sapiens 0 442
ENST00000400341 HLA-C-001 protein_coding Homo_sapiens 0 444
ENST00000400394 HLA-C-001 protein_coding Homo_sapiens 0 444
ENST00000400395 HLA-C-004 protein_coding Homo_sapiens 0 444
ENST00000400665 HLA-G-002 protein_coding Homo_sapiens 0 394
ENST00000400682 HLA-G-002 protein_coding Homo_sapiens 0 394
ENST00000406611 HCG4B-001 unprocessed_pseudogene Homo_sapiens 3.99931e-42 176
ENST00000412263 HLA-G-004 protein_coding Homo_sapiens 0 235
ENST00000413313 HCG4B-001 unprocessed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000413460 HCG4P3-001 unprocessed_pseudogene Homo_sapiens 0 191
ENST00000413609 HLA-A-003 protein_coding Homo_sapiens 0 425
ENST00000414249 HLA-C-004 protein_coding Homo_sapiens 0 472
ENST00000414592 HLA-A-003 protein_coding Homo_sapiens 0 464
ENST00000414972 HCG4P8-001 unprocessed_pseudogene Homo_sapiens 0 207
ENST00000415537 HLA-C-007 protein_coding Homo_sapiens 0 453
ENST00000415687 HLA-G-006 protein_coding Homo_sapiens 0 235
ENST00000416096 HLA-A-003 protein_coding Homo_sapiens 0 392
ENST00000417944 HCG4P5-001 unprocessed_pseudogene Homo_sapiens 0 209
ENST00000417978 HLA-A-002 protein_coding Homo_sapiens 0 392
ENST00000418496 HCG4P3-001 unprocessed_pseudogene Homo_sapiens 5.60519e-45 185
ENST00000418780 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 283
ENST00000419135 HLA-C-003 protein_coding Homo_sapiens 0 455
ENST00000419590 HLA-C-002 protein_coding Homo_sapiens 0 472
ENST00000420073 HCG4P3-001 unprocessed_pseudogene Homo_sapiens 0 191
ENST00000420206 HLA-C-001 protein_coding Homo_sapiens 0 460
ENST00000420559 HLA-G-002 protein_coding Homo_sapiens 0 405
ENST00000421242 HCG4B-001 unprocessed_pseudogene Homo_sapiens 5.60519e-45 185
ENST00000422371 HLA-G-002 protein_coding Homo_sapiens 0 405
ENST00000422726 HLA-C-002 protein_coding Homo_sapiens 0 464
ENST00000422921 HLA-C-004 protein_coding Homo_sapiens 0 460
ENST00000423011 HLA-G-001 protein_coding Homo_sapiens 0 394
ENST00000423373 HLA-G-001 protein_coding Homo_sapiens 0 405
ENST00000423509 HLA-C-003 protein_coding Homo_sapiens 0 464
ENST00000424832 HLA-C-001 protein_coding Homo_sapiens 0 464
ENST00000425509 HCG4P3-001 unprocessed_pseudogene Homo_sapiens 0 191
ENST00000426520 HCG4P8-001 unprocessed_pseudogene Homo_sapiens 0 213
ENST00000426863 HLA-G-004 protein_coding Homo_sapiens 0 235
ENST00000428199 HCG4P5-001 unprocessed_pseudogene Homo_sapiens 0 215
ENST00000428321 HCG4B-001 unprocessed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000428701 HLA-G-201 protein_coding Homo_sapiens 0 405
ENST00000428952 HLA-G-001 protein_coding Homo_sapiens 0 405
ENST00000428988 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 289
ENST00000429297 HCG4P8-001 unprocessed_pseudogene Homo_sapiens 0 213
ENST00000429656 HCG4P5-001 unprocessed_pseudogene Homo_sapiens 0 220
ENST00000429754 HCG4P3-001 unprocessed_pseudogene Homo_sapiens 0 191
ENST00000429840 HLA-C-002 protein_coding Homo_sapiens 0 455
ENST00000429890 HLA-G-006 protein_coding Homo_sapiens 0 235
ENST00000430151 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 300
ENST00000430253 HLA-G-005 protein_coding Homo_sapiens 0 230
ENST00000430940 HLA-C-004 protein_coding Homo_sapiens 0 464
ENST00000431463 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 283
ENST00000431930 HLA-A-001 protein_coding Homo_sapiens 0 392
ENST00000433153 HLA-C-004 protein_coding Homo_sapiens 0 455
ENST00000434881 HLA-G-002 protein_coding Homo_sapiens 0 394
ENST00000434884 HLA-C-002 protein_coding Homo_sapiens 0 444
ENST00000434907 HLA-G-004 protein_coding Homo_sapiens 0 230
ENST00000435665 HCG4B-001 unprocessed_pseudogene Homo_sapiens 5.60519e-45 185
ENST00000435780 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 283
ENST00000437368 HLA-C-007 protein_coding Homo_sapiens 0 472
ENST00000437770 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 305
ENST00000438171 HLA-C-001 protein_coding Homo_sapiens 0 472
ENST00000438861 HLA-A-002 protein_coding Homo_sapiens 0 425
ENST00000440795 HCG4P8-001 unprocessed_pseudogene Homo_sapiens 0 207
ENST00000442281 HCG4P5-001 unprocessed_pseudogene Homo_sapiens 0 204
ENST00000442939 HLA-A-003 protein_coding Homo_sapiens 0 392
ENST00000443049 HCG4P8-001 unprocessed_pseudogene Homo_sapiens 0 213
ENST00000443552 HLA-A-001 protein_coding Homo_sapiens 0 392
ENST00000444098 HLA-G-001 protein_coding Homo_sapiens 0 394
ENST00000444289 HLA-A-002 protein_coding Homo_sapiens 0 392
ENST00000445011 HCG4P8-001 unprocessed_pseudogene Homo_sapiens 0 207
ENST00000445075 HLA-C-007 protein_coding Homo_sapiens 0 455
ENST00000445373 HLA-G-006 protein_coding Homo_sapiens 0 230
ENST00000445820 HCG4P5-001 unprocessed_pseudogene Homo_sapiens 0 215
ENST00000448306 HLA-G-006 protein_coding Homo_sapiens 0 230
ENST00000448362 HLA-C-007 protein_coding Homo_sapiens 0 444
ENST00000449127 HLA-G-001 protein_coding Homo_sapiens 0 405
ENST00000449884 HLA-C-007 protein_coding Homo_sapiens 0 444
ENST00000450128 HCG4B-001 unprocessed_pseudogene Homo_sapiens 5.60519e-45 185
ENST00000450342 HLA-A-003 protein_coding Homo_sapiens 0 448
ENST00000450479 HCG4P5-001 unprocessed_pseudogene Homo_sapiens 0 220
ENST00000450984 HLA-G-002 protein_coding Homo_sapiens 0 405
ENST00000451967 HCG4P5-001 unprocessed_pseudogene Homo_sapiens 0 209
ENST00000452577 HLA-G-004 protein_coding Homo_sapiens 0 235
ENST00000452715 HLA-G-004 protein_coding Homo_sapiens 0 230
ENST00000453057 HLA-A-001 protein_coding Homo_sapiens 0 425
ENST00000453494 HCG4B-001 unprocessed_pseudogene Homo_sapiens 0 191
ENST00000453518 HCG4P5-001 unprocessed_pseudogene Homo_sapiens 0 226
ENST00000453809 HLA-C-003 protein_coding Homo_sapiens 0 472
ENST00000453975 HLA-A-003 protein_coding Homo_sapiens 0 425
ENST00000454033 HLA-C-007 protein_coding Homo_sapiens 0 460
ENST00000454091 HLA-A-001 protein_coding Homo_sapiens 0 464
ENST00000454587 HCG4P3-001 unprocessed_pseudogene Homo_sapiens 0 191
ENST00000455882 HLA-A-002 protein_coding Homo_sapiens 0 425
ENST00000455932 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 283
ENST00000456012 HLA-A-001 protein_coding Homo_sapiens 0 448
ENST00000456487 HLA-C-002 protein_coding Homo_sapiens 0 460
ENST00000457132 HLA-G-006 protein_coding Homo_sapiens 0 235
ENST00000457533 HCG4P3-001 unprocessed_pseudogene Homo_sapiens 5.60519e-45 185
ENST00000457697 HCG4P8-001 unprocessed_pseudogene Homo_sapiens 0 213
ENST00000457806 HLA-C-007 protein_coding Homo_sapiens 0 464
ENST00000457879 HLA-A-001 protein_coding Homo_sapiens 0 425
ENST00000457903 HLA-C-001 protein_coding Homo_sapiens 0 455
ENST00000458060 HCG4P3-001 unprocessed_pseudogene Homo_sapiens 0 191
ENST00000458192 HLA-C-003 protein_coding Homo_sapiens 0 460
ENST00000458668 HLA-C-002 protein_coding Homo_sapiens 0 444
ENST00000459768 HLA-G-003 retained_intron Homo_sapiens 0 405
ENST00000460029 HLA-J-002 processed_transcript Homo_sapiens 0 200
ENST00000460173 HLA-J-003 processed_transcript Homo_sapiens 0 195
ENST00000460542 HLA-A-006 retained_intron Homo_sapiens 0 220
ENST00000461285 HLA-C-005 retained_intron Homo_sapiens 0 220
ENST00000461470 HLA-C-005 retained_intron Homo_sapiens 0 220
ENST00000461713 HLA-J-002 processed_transcript Homo_sapiens 0 195
ENST00000461903 HLA-A-007 retained_intron Homo_sapiens 0 231
ENST00000461937 HLA-C-009 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000461996 HLA-A-006 retained_intron Homo_sapiens 0 237
ENST00000462184 HLA-A-007 retained_intron Homo_sapiens 0 215
ENST00000462536 HLA-A-005 retained_intron Homo_sapiens 0 237
ENST00000462600 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 359
ENST00000462773 HLA-J-003 processed_transcript Homo_sapiens 0 200
ENST00000462851 HLA-C-008 retained_intron Homo_sapiens 0 462
ENST00000462986 HLA-A-007 retained_intron Homo_sapiens 0 231
ENST00000463360 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 364
ENST00000464623 HLA-C-012 retained_intron Homo_sapiens 0 226
ENST00000464713 HLA-A-005 retained_intron Homo_sapiens 0 231
ENST00000464914 HLA-C-009 nonsense_mediated_decay Homo_sapiens 0 468
ENST00000465497 HLA-C-005 retained_intron Homo_sapiens 0 237
ENST00000465498 HLA-A-007 retained_intron Homo_sapiens 0 220
ENST00000466488 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000467814 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000467922 HLA-C-008 retained_intron Homo_sapiens 0 444
ENST00000468687 HLA-J-002 processed_transcript Homo_sapiens 0 200
ENST00000468902 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 364
ENST00000468995 HLA-A-006 retained_intron Homo_sapiens 0 220
ENST00000469281 HLA-J-002 processed_transcript Homo_sapiens 0 200
ENST00000469347 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000469472 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000469544 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000470176 HLA-C-008 retained_intron Homo_sapiens 0 438
ENST00000470534 HLA-A-007 retained_intron Homo_sapiens 0 220
ENST00000470780 HLA-A-002 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000471291 HLA-A-005 retained_intron Homo_sapiens 0 220
ENST00000473052 HLA-J-003 processed_transcript Homo_sapiens 0 200
ENST00000473059 HLA-A-005 retained_intron Homo_sapiens 0 215
ENST00000473396 HLA-J-002 processed_transcript Homo_sapiens 0 200
ENST00000473825 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 364
ENST00000473928 HLA-J-003 processed_transcript Homo_sapiens 0 200
ENST00000476132 HLA-A-007 retained_intron Homo_sapiens 0 220
ENST00000476248 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000477650 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 364
ENST00000478108 HLA-G-003 retained_intron Homo_sapiens 0 394
ENST00000478141 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 364
ENST00000478258 HLA-A-006 retained_intron Homo_sapiens 0 231
ENST00000478355 HLA-G-003 retained_intron Homo_sapiens 0 405
ENST00000478519 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000479320 HLA-A-006 retained_intron Homo_sapiens 0 231
ENST00000479494 HLA-A-006 retained_intron Homo_sapiens 0 220
ENST00000479527 HLA-C-008 retained_intron Homo_sapiens 0 438
ENST00000479546 HLA-C-009 processed_transcript Homo_sapiens 0 455
ENST00000479595 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000479675 HLA-A-006 retained_intron Homo_sapiens 0 220
ENST00000479969 HLA-A-007 retained_intron Homo_sapiens 0 220
ENST00000480429 HLA-C-008 retained_intron Homo_sapiens 0 466
ENST00000480953 HLA-G-003 retained_intron Homo_sapiens 0 394
ENST00000481018 HLA-A-006 retained_intron Homo_sapiens 0 215
ENST00000481588 HLA-C-005 retained_intron Homo_sapiens 0 248
ENST00000481951 HLA-J-003 processed_transcript Homo_sapiens 0 195
ENST00000482006 HLA-C-012 retained_intron Homo_sapiens 0 259
ENST00000482179 HLA-C-012 retained_intron Homo_sapiens 0 231
ENST00000484378 HLA-C-012 retained_intron Homo_sapiens 0 244
ENST00000484755 HLA-G-003 retained_intron Homo_sapiens 0 405
ENST00000485166 HLA-A-005 retained_intron Homo_sapiens 0 220
ENST00000485321 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000486252 HLA-J-002 processed_transcript Homo_sapiens 0 200
ENST00000486526 HLA-J-003 processed_transcript Homo_sapiens 0 200
ENST00000486553 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000487245 HLA-C-005 retained_intron Homo_sapiens 0 243
ENST00000487534 HLA-A-005 retained_intron Homo_sapiens 0 220
ENST00000488273 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000488889 HLA-A-002 processed_transcript Homo_sapiens 0 464
ENST00000490454 HLA-A-005 retained_intron Homo_sapiens 0 220
ENST00000490720 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 364
ENST00000490987 HLA-J-003 processed_transcript Homo_sapiens 0 200
ENST00000491141 HLA-G-003 retained_intron Homo_sapiens 0 394
ENST00000491984 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000492006 HLA-J-002 processed_transcript Homo_sapiens 0 200
ENST00000492107 HLA-A-007 retained_intron Homo_sapiens 0 237
ENST00000494247 HLA-G-003 retained_intron Homo_sapiens 0 405
ENST00000494367 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 364
ENST00000494425 HLA-J-002 processed_transcript Homo_sapiens 0 195
ENST00000494784 HLA-J-003 processed_transcript Homo_sapiens 0 200
ENST00000494823 HLA-C-008 retained_intron Homo_sapiens 0 455
ENST00000494871 HLA-C-009 processed_transcript Homo_sapiens 0 444
ENST00000495183 HLA-A-005 retained_intron Homo_sapiens 0 231
ENST00000495207 HLA-C-012 retained_intron Homo_sapiens 0 243
ENST00000495614 HLA-C-012 retained_intron Homo_sapiens 0 226
ENST00000495635 HLA-C-005 retained_intron Homo_sapiens 0 226
ENST00000495725 HLA-C-009 processed_transcript Homo_sapiens 0 460
ENST00000495835 HLA-C-008 retained_intron Homo_sapiens 0 451
ENST00000495898 HLA-C-009 processed_transcript Homo_sapiens 0 472
ENST00000496419 HLA-C-005 retained_intron Homo_sapiens 0 248
ENST00000497204 HLA-C-012 retained_intron Homo_sapiens 0 250
ENST00000546545 HLA-G-203 protein_coding Homo_sapiens 0 394
ENST00000546634 HLA-G-205 protein_coding Homo_sapiens 0 405
ENST00000547241 HLA-G-204 protein_coding Homo_sapiens 0 394
ENST00000547271 HLA-A-214 protein_coding Homo_sapiens 0 425
ENST00000547522 HLA-A-209 protein_coding Homo_sapiens 0 425
ENST00000547931 HLA-G-207 protein_coding Homo_sapiens 0 405
ENST00000549224 HLA-A-203 protein_coding Homo_sapiens 0 448
ENST00000549869 HLA-A-207 protein_coding Homo_sapiens 0 392
ENST00000550728 HLA-A-213 protein_coding Homo_sapiens 0 448
ENST00000550897 HLA-G-206 protein_coding Homo_sapiens 0 405
ENST00000551120 HLA-A-211 protein_coding Homo_sapiens 0 392
ENST00000552193 HLA-A-212 protein_coding Homo_sapiens 0 392
ENST00000552493 HLA-A-205 protein_coding Homo_sapiens 0 464
ENST00000552498 HLA-A-208 protein_coding Homo_sapiens 0 392
ENST00000553052 HLA-G-202 protein_coding Homo_sapiens 0 394
ENST00000611149 HLA-A-210 protein_coding Homo_sapiens 0 425
ENST00000611421 HCG4P8-001 unprocessed_pseudogene Homo_sapiens 0 207
ENST00000612360 HLA-G-004 protein_coding Homo_sapiens 0 230
ENST00000612644 HLA-A-206 protein_coding Homo_sapiens 0 464
ENST00000615098 HLA-G-001 protein_coding Homo_sapiens 0 394
ENST00000615464 HLA-G-002 protein_coding Homo_sapiens 0 394
ENST00000615789 HLA-G-003 retained_intron Homo_sapiens 0 394
ENST00000616730 HLA-A-204 protein_coding Homo_sapiens 0 448
ENST00000618039 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000618812 HLA-G-208 protein_coding Homo_sapiens 0 394
ENST00000620168 HLA-A-202 protein_coding Homo_sapiens 0 350
ENST00000622601 HLA-G-006 protein_coding Homo_sapiens 0 230

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