C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: arrestin 3, retinal
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060890 Arr3 10090 + X:100605497-100618493 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000113769 Arr3-001 100605497-100618493 protein_coding
  ENSMUST00000131906 Arr3-002 100605562-100618493 retained_intron
  ENSMUST00000135237 Arr3-003 100605523-100613633 retained_intron
  ENSMUST00000141676 Arr3-005 100605544-100613073 retained_intron
  ENSMUST00000154771 Arr3-004 100605555-100613841 retained_intron
  ENSMUST00000164940 Arr3-007 100605647-100611944 protein_coding
  ENSMUST00000166688 Arr3-008 100611839-100614440 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000113769ENSMUST00000131906ENSMUST00000135237ENSMUST00000141676ENSMUST00000164940ENSMUST00000166688
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113769 N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A 0.024±0.00 0.032±0.00 N/A
ENSMUST00000131906 N/A N/A N/A 0.091±0.00 N/A 0.076±0.00 0.004±0.00 0.036±0.00 0.051±0.00 0.053±0.03 N/A 0.007±0.00
ENSMUST00000135237 N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A
ENSMUST00000141676 0.052±0.00 N/A 0.022±0.00 N/A N/A N/A N/A N/A 0.078±0.01 0.065±0.00 0.059±0.00 0.046±0.00
ENSMUST00000164940 N/A 0.577±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166688 0.050±0.00 0.146±0.00 0.010±0.00 N/A 0.049±0.00 0.043±0.00 N/A 0.059±0.00 N/A 0.217±0.13 0.034±0.00 0.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008M CIL_00008M_0002 CGP X:100590154-100618493

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0001917 ISO photoreceptor inner segment
GO:0001932 IDA regulation of protein phosphorylation
GO:0002046 IDA opsin binding
GO:0005515 IEA protein binding
GO:0006897 IDA endocytosis
GO:0007165 IEA signal transduction
GO:0007601 IEA visual perception
GO:0045202 IDA synapse
GO:0051219 IDA phosphoprotein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056511 arr3a arrestin 3a, retinal (X-arrestin) protein_coding Danio_rerio
ENSG00000120500 ARR3 arrestin 3, retinal (X-arrestin) protein_coding Homo_sapiens

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