C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00008M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186912-ENSG00000120500 CGP 9606 X:70258170-70281840
GeneTranscriptPositionBiotype
ENSG00000120500 (ARR3)
arrestin 3, retinal (X-arrestin) 		ENST00000307959 (ARR3-002) 70268352-70281840 protein_coding
ENST00000374495 (ARR3-001) 70268305-70281232 protein_coding
ENST00000477379 (ARR3-004) 70268334-70270009 retained_intron
ENST00000480877 (ARR3-003) 70268346-70276707 protein_coding
ENST00000620997 (ARR3-201) 70268335-70281840 protein_coding
ENSG00000186912 (P2RY4)
pyrimidinergic receptor P2Y, G-protein coupled, 4 		ENST00000374519 (P2RY4-001) 70258170-70259764 protein_coding
CIL_00008M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044359-ENSMUSG00000060890 CGP 10090 X:100590154-100618493
GeneTranscriptPositionBiotype
ENSMUSG00000044359 (P2ry4)
pyrimidinergic receptor P2Y, G-protein coupled, 4 		ENSMUST00000053373 (P2ry4-001) 100590154-100594869 protein_coding
ENSMUSG00000060890 (Arr3)
arrestin 3, retinal 		ENSMUST00000113769 (Arr3-001) 100605497-100618493 protein_coding
ENSMUST00000131906 (Arr3-002) 100605562-100618493 retained_intron
ENSMUST00000135237 (Arr3-003) 100605523-100613633 retained_intron
ENSMUST00000141676 (Arr3-005) 100605544-100613073 retained_intron
ENSMUST00000154771 (Arr3-004) 100605555-100613841 retained_intron
ENSMUST00000164940 (Arr3-007) 100605647-100611944 protein_coding
ENSMUST00000166688 (Arr3-008) 100611839-100614440 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008M_0001ENSG00000120500ENST00000307959ENST00000374495ENST00000477379ENST00000480877ENST00000620997ENSG00000186912ENST00000374519CIL_00008M_0002ENSMUSG00000044359ENSMUST00000053373ENSMUSG00000060890ENSMUST00000113769ENSMUST00000131906ENSMUST00000135237ENSMUST00000141676ENSMUST00000154771ENSMUST00000164940ENSMUST00000166688
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008M_0001ENSG00000120500ENST00000307959ENST00000374495ENST00000477379ENST00000480877ENST00000620997ENSG00000186912ENST00000374519CIL_00008M_0002ENSMUSG00000044359ENSMUST00000053373ENSMUSG00000060890ENSMUST00000113769ENSMUST00000131906ENSMUST00000135237ENSMUST00000141676ENSMUST00000164940ENSMUST00000166688
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120500 ENST00000307959 0.077±0.00 0.023±0.00 N/A N/A 0.074±0.00 0.078±0.00 N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.074±0.00
ENST00000374495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 0.050±0.00 N/A
ENST00000477379 N/A 0.077±0.00 0.148±0.00 N/A N/A N/A N/A N/A 0.828±0.00 N/A N/A N/A N/A N/A
ENST00000480877 N/A 0.107±0.00 N/A 0.023±0.00 0.234±0.00 N/A 0.534±0.00 N/A N/A 0.031±0.00 N/A N/A 0.017±0.00 0.070±0.00
ENST00000620997 N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186912 ENST00000374519 N/A 0.070±0.00 0.641±0.00 0.211±0.00 0.161±0.13 0.316±0.00 0.026±0.00 0.060±0.00 0.194±0.00 0.707±0.00 N/A 0.065±0.00 0.048±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044359 ENSMUST00000053373 0.009±0.00 0.032±0.00 0.008±0.00 0.023±0.01 0.078±0.04 0.991±0.39 0.009±0.00 N/A N/A 0.177±0.22 0.021±0.01 0.040±0.02 0.033±0.02 0.010±0.00
ENSMUSG00000060890 ENSMUST00000113769 N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 0.032±0.00 N/A
ENSMUST00000131906 N/A N/A N/A 0.091±0.00 N/A N/A 0.076±0.00 N/A 0.004±0.00 0.036±0.00 0.051±0.00 0.053±0.03 N/A 0.007±0.00
ENSMUST00000135237 N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A
ENSMUST00000141676 0.052±0.00 N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A 0.078±0.01 0.065±0.00 0.059±0.00 0.046±0.00
ENSMUST00000154771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164940 N/A 0.577±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166688 0.050±0.00 0.146±0.00 0.010±0.00 N/A 0.049±0.00 N/A 0.043±0.00 N/A N/A 0.059±0.00 N/A 0.217±0.13 0.034±0.00 0.098±0.00

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