C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061904 Slc25a3 10090 - 10:91116574-91124059 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076694 Slc25a3-001 91116574-91124059 protein_coding
  ENSMUST00000163246 Slc25a3-005 91116791-91123957 nonsense_mediated_decay
  ENSMUST00000164505 Slc25a3-004 91116808-91123955 protein_coding
  ENSMUST00000167455 Slc25a3-008 91117011-91119837 retained_intron
  ENSMUST00000169339 Slc25a3-007 91118173-91120725 processed_transcript
  ENSMUST00000170810 Slc25a3-002 91116792-91124003 protein_coding
  ENSMUST00000171960 Slc25a3-006 91118199-91122223 retained_intron
  ENSMUST00000172442 Slc25a3-003 91119775-91124022 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076694ENSMUST00000163246ENSMUST00000164505ENSMUST00000167455ENSMUST00000170810ENSMUST00000171960ENSMUST00000172442
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076694 170.084±15.71 885.893±91.05 163.261±12.47 92.527±2.72 145.030±41.79 395.451±45.94 N/A 439.850±16.19 161.432±35.73 103.337±15.16 N/A 255.632±103.41 120.847±95.99 59.704±4.23
ENSMUST00000163246 N/A 1110.098±155.33 N/A N/A N/A N/A N/A N/A 43.708±0.00 N/A N/A N/A N/A N/A
ENSMUST00000164505 N/A N/A 44.931±0.00 173.895±0.00 42.282±0.00 N/A N/A N/A N/A N/A N/A 103.208±80.10 115.399±51.79 21.785±0.00
ENSMUST00000167455 N/A N/A N/A N/A 103.041±0.00 N/A N/A N/A 45.332±0.00 N/A N/A 87.553±0.32 40.414±11.73 N/A
ENSMUST00000170810 N/A N/A N/A N/A 72.121±14.32 N/A 686.300±89.64 N/A N/A 27.144±3.98 404.962±24.17 N/A N/A 13.876±0.00
ENSMUST00000171960 N/A N/A N/A N/A 71.365±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172442 N/A 182.202±25.61 N/A 6.870±0.18 18.495±3.90 72.391±19.71 N/A N/A 12.936±2.04 11.940±3.21 N/A 83.193±58.79 4.850±0.00 8.176±3.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090D CIL_00090D_0002 VISTA 10:90885612-91488565
CIL_0003XT CIL_0003XT_0002 CGP 10:91116574-91171582

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0015293 IEA symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0032403 ISO protein complex binding
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025566 slc25a3b solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b protein_coding Danio_rerio
ENSDARG00000027424 slc25a3a solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a protein_coding Danio_rerio
ENSG00000075415 SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 protein_coding Homo_sapiens

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