C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000075415 SLC25A3 9606 + 12:98593591-98606379 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000188376 SLC25A3-001 98593625-98601997 protein_coding
  ENST00000228318 SLC25A3-201 98593625-98601997 protein_coding
  ENST00000401722 SLC25A3-008 98593591-98606379 protein_coding
  ENST00000546766 SLC25A3-003 98593655-98601997 retained_intron
  ENST00000547444 SLC25A3-010 98597565-98598567 retained_intron
  ENST00000547534 SLC25A3-015 98593686-98598073 protein_coding
  ENST00000547869 SLC25A3-011 98601065-98602168 retained_intron
  ENST00000547908 SLC25A3-009 98595664-98598563 retained_intron
  ENST00000548046 SLC25A3-013 98593656-98598034 protein_coding
  ENST00000548480 SLC25A3-012 98599858-98601708 retained_intron
  ENST00000548847 SLC25A3-002 98593725-98601668 protein_coding
  ENST00000549338 SLC25A3-007 98593696-98601674 protein_coding
  ENST00000550695 SLC25A3-014 98593686-98598036 protein_coding
  ENST00000551123 SLC25A3-006 98593696-98601707 nonsense_mediated_decay
  ENST00000551265 SLC25A3-016 98593686-98594503 protein_coding
  ENST00000551917 SLC25A3-005 98593650-98601707 protein_coding
  ENST00000552981 SLC25A3-004 98593660-98601708 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000188376ENST00000401722ENST00000546766ENST00000547534ENST00000548046ENST00000548480ENST00000548847ENST00000549338ENST00000551917ENST00000552981
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000188376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.426±0.00 N/A N/A
ENST00000401722 N/A N/A 1.830±0.00 8.867±1.98 N/A 2.160±0.00 N/A 4.300±2.18 4.771±0.08 1.553±0.00 N/A 3.443±1.81 N/A 3.013±0.00
ENST00000546766 N/A N/A N/A N/A 4.357±0.00 N/A N/A N/A N/A N/A N/A 3.952±0.00 N/A N/A
ENST00000547534 N/A N/A 44.174±0.00 N/A N/A 42.227±0.00 N/A 40.588±0.00 69.150±0.00 23.259±0.00 N/A 33.494±0.00 N/A N/A
ENST00000548046 N/A N/A N/A N/A N/A N/A 188.310±0.00 N/A N/A N/A 149.622±0.00 N/A N/A N/A
ENST00000548480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.336±0.00
ENST00000548847 N/A N/A N/A 22.729±0.00 17.010±0.00 12.944±0.00 N/A 11.637±0.00 N/A N/A N/A N/A N/A N/A
ENST00000549338 34.668±0.00 49.014±0.00 N/A 60.121±0.00 68.068±0.00 N/A N/A 104.035±0.00 N/A 45.607±0.00 N/A 194.166±0.00 149.404±0.00 54.183±0.00
ENST00000551917 N/A N/A N/A N/A N/A N/A 204.427±170.37 N/A N/A N/A 102.761±75.82 N/A N/A N/A
ENST00000552981 122.658±0.00 157.935±0.00 25.549±0.00 70.712±16.88 93.759±62.11 142.539±90.57 61.565±27.17 81.636±42.62 88.203±46.59 64.349±42.29 39.745±13.24 154.414±89.78 178.960±107.08 121.560±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090D CIL_00090D_0001 VISTA 12:98189717-98793261
CIL_0000VM CIL_0000VM_0002 CGP 12:98515512-98606379

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006091 TAS generation of precursor metabolites and energy
GO:0006810 TAS transport
GO:0015293 IEA symporter activity
GO:0015320 TAS phosphate ion carrier activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0032403 IDA protein complex binding
GO:0035435 TAS phosphate ion transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025566 slc25a3b solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b protein_coding Danio_rerio
ENSDARG00000027424 slc25a3a solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a protein_coding Danio_rerio
ENSMUSG00000061904 Slc25a3 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein_coding Mus_musculus

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