C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA I830012O16 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062488 I830012O16Rik 10090 + 19:34607970-34613401 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076249 I830012O16Rik-001 34607970-34613401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076249
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076249 1.386±0.25 1.089±0.52 4.270±1.68 0.150±0.15 1.438±0.75 0.253±0.10 0.554±0.06 2.140±0.57 1.148±0.78 2.606±0.44 1.309±0.22 0.522±0.47 0.456±0.38 0.049±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BE CIL_0007BE_000D CGP 19:34592888-34613401
CIL_0007BE CIL_0007BE_000A CGP 19:34607970-34640743

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0035457 IEA cellular response to interferon-alpha

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007467 si:dkey-26g8.11 si:dkey-26g8.11 protein_coding Danio_rerio
ENSDARG00000043584 ifit2 interferon-induced protein with tetratricopeptide repeats 2 protein_coding Danio_rerio
ENSDARG00000056976 si:ch211-240h7.2 si:ch211-240h7.2 protein_coding Danio_rerio
ENSDARG00000057173 zgc:123282 zgc:123282 protein_coding Danio_rerio
ENSDARG00000071012 si:dkey-116m16.3 si:dkey-116m16.3 protein_coding Danio_rerio
ENSDARG00000088069 CR759879.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090537 si:dkey-26g8.10 si:dkey-26g8.10 protein_coding Danio_rerio
ENSDARG00000090977 ifit5 interferon-induced protein with tetratricopeptide repeats 5 protein_coding Danio_rerio
ENSG00000119917 IFIT3 interferon-induced protein with tetratricopeptide repeats 3 protein_coding Homo_sapiens

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