C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon-induced protein with tetratricopeptide repeats 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119917 IFIT3 9606 + 10:89327894-89340971 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371811 IFIT3-002 89332484-89340971 protein_coding
  ENST00000371818 IFIT3-001 89327894-89340971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371811ENST00000371818
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371811 0.941±0.00 5.893±0.00 1.328±0.00 2.407±1.16 5.103±0.22 0.836±0.34 1.934±1.07 0.405±0.00 N/A 12.390±5.55 1.684±0.38 2.016±0.47 6.638±1.41 2.344±0.88
ENST00000371818 6.650±0.00 2.276±0.00 0.280±0.00 2.222±1.09 4.060±2.11 2.173±1.34 0.880±0.10 4.333±1.42 1.193±0.52 2.597±0.57 N/A 2.457±1.29 10.906±7.66 2.741±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IW CIL_0001IW_0001 CGP 10:89205629-89414557
CIL_0001IT CIL_0001IT_0001 CGP 10:89213569-89414557
CIL_0007BE CIL_0007BE_0006 CGP 10:89301955-89340971
CIL_0007BE CIL_0007BE_0005 CGP 10:89327894-89385205

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 TAS cytosol
GO:0008285 IDA negative regulation of cell proliferation
GO:0009615 IMP response to virus
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0035457 IEA cellular response to interferon-alpha
GO:0042802 IPI identical protein binding
GO:0043066 IDA negative regulation of apoptotic process
GO:0051607 IEA defense response to virus
GO:0060337 TAS type I interferon signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007467 si:dkey-26g8.11 si:dkey-26g8.11 protein_coding Danio_rerio
ENSDARG00000043584 ifit2 interferon-induced protein with tetratricopeptide repeats 2 protein_coding Danio_rerio
ENSDARG00000056976 si:ch211-240h7.2 si:ch211-240h7.2 protein_coding Danio_rerio
ENSDARG00000057173 zgc:123282 zgc:123282 protein_coding Danio_rerio
ENSDARG00000071012 si:dkey-116m16.3 si:dkey-116m16.3 protein_coding Danio_rerio
ENSDARG00000088069 CR759879.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090537 si:dkey-26g8.10 si:dkey-26g8.10 protein_coding Danio_rerio
ENSDARG00000090977 ifit5 interferon-induced protein with tetratricopeptide repeats 5 protein_coding Danio_rerio
ENSMUSG00000062488 I830012O16Rik RIKEN cDNA I830012O16 gene protein_coding Mus_musculus
ENSMUSG00000074896 Ifit3 interferon-induced protein with tetratricopeptide repeats 3 protein_coding Mus_musculus

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