C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4930512M02 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062511 4930512M02Rik 10090 - 11:11589223-11627835 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081896 4930512M02Rik-001 11589223-11627824 protein_coding
  ENSMUST00000149910 4930512M02Rik-002 11623711-11627835 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081896ENSMUST00000149910
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081896 0.066±0.03 N/A 0.200±0.03 2.605±3.11 0.141±0.02 0.146±0.02 0.095±0.04 0.089±0.03 0.160±0.04 0.079±0.01 1.167±1.55 0.273±0.20 8.482±3.27
ENSMUST00000149910 0.066±0.02 0.570±0.00 N/A N/A 0.103±0.06 0.088±0.00 0.094±0.04 0.277±0.20 0.169±0.00 N/A 0.295±0.01 5.127±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XP CIL_0008XP_0002 VISTA 11:11227967-11828770
CIL_0008P3 CIL_0008P3_0002 VISTA 11:11375621-11977027
CIL_0008XT CIL_0008XT_0002 VISTA 11:11399170-12000205
CIL_0007SD CIL_0007SD_0002 VISTA 11:11453227-12053958
CIL_0007MQ CIL_0007MQ_0003 UCNEbase 11:11528251-11753919
CIL_00089U CIL_00089U_0002 VISTA 11:11536402-12137998

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

No Homologs available.

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