C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NmrA-like family domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063445 Nmral1 10090 - 16:4710059-4719356 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074970 Nmral1-003 4712295-4719112 protein_coding
  ENSMUST00000079130 Nmral1-001 4711317-4719356 protein_coding
  ENSMUST00000115851 Nmral1-002 4711317-4719156 protein_coding
  ENSMUST00000120056 Nmral1-004 4710059-4719109 protein_coding
  ENSMUST00000124977 Nmral1-006 4714509-4719088 retained_intron
  ENSMUST00000125140 Nmral1-005 4715825-4719104 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074970ENSMUST00000079130ENSMUST00000115851ENSMUST00000120056ENSMUST00000124977ENSMUST00000125140
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074970 1.318±0.11 0.358±0.00 1.036±0.13 10.508±5.09 1.380±0.00 1.401±0.50 N/A 0.630±0.00 11.042±10.05 1.122±0.00 0.633±0.25 3.686±1.46 2.517±0.70 0.421±0.21
ENSMUST00000079130 2.035±0.80 0.653±0.32 1.636±0.70 7.534±5.82 1.885±0.64 0.756±0.09 0.627±0.06 0.872±0.37 6.550±7.67 N/A 0.796±0.32 2.169±0.93 2.134±1.04 0.214±0.09
ENSMUST00000115851 2.712±1.64 1.350±0.43 2.014±0.51 6.622±3.69 1.195±0.33 1.398±0.54 0.659±0.16 1.035±0.49 5.846±4.48 0.972±0.37 0.827±0.23 2.561±1.11 2.393±1.69 0.189±0.00
ENSMUST00000120056 0.872±0.14 0.530±0.18 0.298±0.00 1.716±0.00 0.767±0.52 0.594±0.24 0.393±0.19 1.529±0.26 0.732±0.16 1.008±0.14 0.129±0.00 2.976±0.95 0.035±0.00 0.145±0.08
ENSMUST00000124977 N/A N/A N/A N/A N/A 0.628±0.00 N/A N/A N/A 0.983±0.00 0.183±0.00 2.493±0.80 N/A 0.242±0.00
ENSMUST00000125140 N/A 0.940±0.34 N/A N/A 1.050±0.00 0.843±0.00 0.466±0.00 N/A 1.584±0.00 N/A N/A 1.679±0.00 N/A 0.240±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BN CIL_0002BN_0002 CGP 16:4639989-4719356
CIL_00009E CIL_00009E_0002 CGP 16:4710059-4766742

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000153406 NMRAL1 NmrA-like family domain containing 1 protein_coding Homo_sapiens

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