C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002BN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103423-ENSG00000153406 CGP 9606 16:4425805-4495763
GeneTranscriptPositionBiotype
ENSG00000103415 (HMOX2)
heme oxygenase (decycling) 2 		ENST00000219700 (HMOX2-004) 4476379-4510346 protein_coding
ENST00000398595 (HMOX2-003) 4495858-4509901 protein_coding
ENST00000406590 (HMOX2-201) 4474703-4510346 protein_coding
ENST00000414777 (HMOX2-202) 4495858-4510346 protein_coding
ENST00000458134 (HMOX2-002) 4476340-4510295 protein_coding
ENST00000570445 (HMOX2-011) 4476459-4508197 protein_coding
ENST00000570622 (HMOX2-012) 4508059-4509779 protein_coding
ENST00000570646 (HMOX2-001) 4475924-4510347 protein_coding
ENST00000572812 (HMOX2-008) 4476412-4507838 protein_coding
ENST00000574466 (HMOX2-007) 4476412-4507900 protein_coding
ENST00000574594 (HMOX2-013) 4476442-4496762 processed_transcript
ENST00000575051 (HMOX2-005) 4474690-4509430 protein_coding
ENST00000575120 (HMOX2-006) 4476406-4509836 protein_coding
ENST00000575129 (HMOX2-010) 4495858-4507904 protein_coding
ENST00000576827 (HMOX2-009) 4476439-4507902 protein_coding
ENST00000613539 (HMOX2-203) 4496146-4510346 protein_coding
ENST00000619528 (HMOX2-204) 4476340-4510346 protein_coding
ENST00000619913 (HMOX2-205) 4476340-4510346 protein_coding
ENSG00000103423 (DNAJA3)
DnaJ (Hsp40) homolog, subfamily A, member 3 		ENST00000262375 (DNAJA3-001) 4425805-4456775 protein_coding
ENST00000355296 (DNAJA3-002) 4425860-4456775 protein_coding
ENST00000431375 (DNAJA3-201) 4425805-4456772 protein_coding
ENST00000570857 (DNAJA3-007) 4425865-4442308 nonsense_mediated_decay
ENST00000572009 (DNAJA3-011) 4434298-4441401 retained_intron
ENST00000572139 (DNAJA3-010) 4433846-4441477 processed_transcript
ENST00000572974 (DNAJA3-008) 4425868-4431868 processed_transcript
ENST00000573120 (DNAJA3-013) 4426048-4437625 retained_intron
ENST00000574393 (DNAJA3-012) 4455492-4456775 processed_transcript
ENST00000574895 (DNAJA3-009) 4425879-4442393 protein_coding
ENST00000575106 (DNAJA3-006) 4425865-4442383 nonsense_mediated_decay
ENST00000576180 (DNAJA3-004) 4449554-4456772 retained_intron
ENST00000576911 (DNAJA3-003) 4425865-4455951 nonsense_mediated_decay
ENST00000577083 (DNAJA3-005) 4440257-4447955 retained_intron
ENSG00000153406 (NMRAL1)
NmrA-like family domain containing 1 		ENST00000283429 (NMRAL1-001) 4461680-4474895 protein_coding
ENST00000404295 (NMRAL1-004) 4461694-4474622 protein_coding
ENST00000571291 (NMRAL1-005) 4463743-4476297 nonsense_mediated_decay
ENST00000571448 (NMRAL1-015) 4461692-4466405 nonsense_mediated_decay
ENST00000572110 (NMRAL1-018) 4461699-4466174 protein_coding
ENST00000572232 (NMRAL1-016) 4461694-4466336 protein_coding
ENST00000572391 (NMRAL1-013) 4463803-4469685 processed_transcript
ENST00000572559 (NMRAL1-006) 4474684-4495763 processed_transcript
ENST00000573520 (NMRAL1-007) 4466163-4474651 nonsense_mediated_decay
ENST00000573533 (NMRAL1-017) 4461785-4464240 retained_intron
ENST00000573571 (NMRAL1-011) 4466211-4474542 protein_coding
ENST00000574425 (NMRAL1-003) 4461695-4474643 protein_coding
ENST00000574733 (NMRAL1-002) 4461691-4476306 protein_coding
ENST00000575002 (NMRAL1-008) 4467005-4474625 processed_transcript
ENST00000575557 (NMRAL1-010) 4469391-4474555 processed_transcript
ENST00000575995 (NMRAL1-009) 4469630-4474556 processed_transcript
ENST00000576176 (NMRAL1-014) 4463568-4469365 protein_coding
ENST00000576935 (NMRAL1-012) 4469443-4474455 processed_transcript
ENSG00000275515 (RP11-295D4.7)
 ENST00000619258 (RP11-295D4.7-001) 4433202-4433387 processed_pseudogene
ENSG00000277170 (RP11-295D4.4)
 ENST00000614983 (RP11-295D4.4-001) 4426902-4427380 sense_intronic
ENSG00000277440 (RP11-295D4.5)
 ENST00000616838 (RP11-295D4.5-001) 4430522-4431103 sense_intronic

Homo sapiens Ensembl (GRCh38)

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Transcripts
Structures from Ensembl
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CIL_0002BN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004069-ENSMUSG00000063445 CGP 10090 16:4639989-4719356
GeneTranscriptPositionBiotype
ENSMUSG00000004069 (Dnaja3)
DnaJ (Hsp40) homolog, subfamily A, member 3 		ENSMUST00000060067 (Dnaja3-001) 4684070-4707695 protein_coding
ENSMUST00000115854 (Dnaja3-002) 4684096-4707695 protein_coding
ENSMUST00000138495 (Dnaja3-003) 4684114-4694245 retained_intron
ENSMUST00000144815 (Dnaja3-004) 4639989-4687292 processed_transcript
ENSMUSG00000039637 (Coro7)
coronin 7 		ENSMUST00000038552 (Coro7-001) 4626133-4679777 protein_coding
ENSMUST00000090480 (Coro7-003) 4652566-4679777 protein_coding
ENSMUST00000123031 (Coro7-004) 4660302-4679713 retained_intron
ENSMUST00000127125 (Coro7-007) 4633324-4635041 retained_intron
ENSMUST00000127850 (Coro7-012) 4675516-4679742 retained_intron
ENSMUST00000130125 (Coro7-006) 4634598-4661922 retained_intron
ENSMUST00000135823 (Coro7-002) 4629059-4679678 nonsense_mediated_decay
ENSMUST00000139072 (Coro7-008) 4632246-4635035 retained_intron
ENSMUST00000143723 (Coro7-005) 4633277-4646716 processed_transcript
ENSMUST00000150028 (Coro7-013) 4627377-4628871 processed_transcript
ENSMUST00000150724 (Coro7-011) 4628752-4629666 retained_intron
ENSMUST00000151156 (Coro7-010) 4631878-4633859 retained_intron
ENSMUSG00000039646 (Vasn)
vasorin 		ENSMUST00000038770 (Vasn-001) 4639941-4650802 protein_coding
ENSMUST00000138044 (Vasn-002) 4639968-4647559 processed_transcript
ENSMUSG00000063445 (Nmral1)
NmrA-like family domain containing 1 		ENSMUST00000074970 (Nmral1-003) 4712295-4719112 protein_coding
ENSMUST00000079130 (Nmral1-001) 4711317-4719356 protein_coding
ENSMUST00000115851 (Nmral1-002) 4711317-4719156 protein_coding
ENSMUST00000120056 (Nmral1-004) 4710059-4719109 protein_coding
ENSMUST00000124977 (Nmral1-006) 4714509-4719088 retained_intron
ENSMUST00000125140 (Nmral1-005) 4715825-4719104 retained_intron

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002BN_0001ENSG00000103415ENST00000219700ENST00000414777ENST00000458134ENST00000570445ENST00000570622ENST00000570646ENST00000575051ENST00000575120ENST00000575129ENST00000613539ENSG00000103423ENST00000262375ENST00000355296ENST00000431375ENST00000575106ENST00000576180ENST00000576911ENSG00000153406ENST00000283429ENST00000404295ENST00000574425ENST00000575002ENSG00000275515ENST00000619258ENSG00000277170ENST00000614983ENSG00000277440ENST00000616838CIL_0002BN_0002ENSMUSG00000004069ENSMUST00000060067ENSMUST00000115854ENSMUST00000138495ENSMUSG00000039637ENSMUST00000038552ENSMUST00000150028ENSMUSG00000039646ENSMUST00000038770ENSMUSG00000063445ENSMUST00000074970ENSMUST00000079130ENSMUST00000115851ENSMUST00000120056ENSMUST00000124977ENSMUST00000125140
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103415 ENST00000219700 10.396±0.00 10.957±0.00 1.813±0.00 10.348±3.94 N/A 5.325±2.61 9.911±7.82 24.733±0.00 26.582±0.00 6.787±5.74 2.804±0.00 10.484±5.49 18.761±1.73 23.858±0.00
ENST00000398595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 52.588±0.00
ENST00000458134 N/A 10.703±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570445 N/A N/A 1.764±0.00 20.089±9.03 2.408±0.00 4.561±0.00 1.398±0.00 N/A 3.032±0.00 N/A 0.868±0.00 42.754±0.00 N/A 29.101±0.00
ENST00000570622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 85.555±0.00 38.515±0.00 100.733±0.00
ENST00000570646 N/A N/A N/A 8.482±0.00 0.802±0.00 N/A 1.058±0.00 N/A N/A 0.752±0.00 N/A 11.433±2.92 10.883±0.00 12.967±0.00
ENST00000572812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575051 N/A N/A N/A N/A N/A N/A 1.182±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000575120 33.167±0.00 33.106±0.00 N/A 25.870±16.21 14.387±11.89 11.043±8.94 23.829±22.16 20.995±18.03 54.718±0.00 35.123±0.00 4.512±3.07 18.112±3.17 23.825±2.64 71.503±0.00
ENST00000575129 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.620±0.00 N/A N/A N/A N/A
ENST00000576827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.346±0.00 N/A N/A
ENST00000619528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103423 ENST00000262375 1.681±0.00 N/A N/A 2.749±0.53 2.932±0.00 3.061±0.31 3.310±2.50 5.693±1.67 4.669±3.40 1.556±0.31 12.044±0.00 3.628±0.94 3.327±0.06 5.563±0.00
ENST00000355296 4.022±0.00 5.010±0.00 0.735±0.00 3.179±0.71 3.624±0.49 2.071±0.14 8.477±5.46 3.629±1.61 6.603±4.85 4.402±0.00 10.200±5.82 8.100±3.96 9.318±5.61 4.767±1.54
ENST00000431375 N/A 4.564±0.00 N/A 4.897±0.00 N/A 4.312±0.00 N/A 4.019±0.00 10.260±0.00 2.391±0.00 8.582±0.00 5.564±0.52 N/A 4.215±0.13
ENST00000570857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.645±0.00 N/A N/A
ENST00000576180 N/A 2.368±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576911 4.308±0.00 5.375±0.00 N/A 8.518±0.00 3.885±2.35 3.983±0.00 1.401±0.00 4.737±2.87 1.506±0.00 2.033±0.00 9.348±0.00 9.873±0.00 11.016±0.00 9.314±2.95
ENST00000577083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153406 ENST00000283429 N/A N/A N/A N/A 1.970±0.00 N/A N/A N/A N/A 3.558±0.00 N/A N/A N/A N/A
ENST00000404295 16.214±0.00 18.751±0.00 2.083±0.00 N/A N/A 10.679±0.00 N/A N/A 5.371±0.00 N/A N/A 16.428±0.57 30.256±4.79 N/A
ENST00000571291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574425 N/A N/A N/A N/A N/A 3.687±0.00 N/A 16.015±11.39 N/A N/A 3.438±0.00 14.200±7.60 N/A N/A
ENST00000574733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575002 N/A N/A N/A N/A 4.763±0.00 N/A N/A 7.778±0.00 N/A N/A 0.814±0.00 N/A N/A N/A
ENST00000575557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275515 ENST00000619258 N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 0.080±0.00 N/A N/A 1.151±0.06 0.593±0.00 0.450±0.03
ENSG00000277170 ENST00000614983 0.176±0.00 0.678±0.00 0.719±0.00 0.506±0.17 0.461±0.13 0.093±0.00 0.770±0.71 N/A 0.059±0.00 0.197±0.14 N/A 0.446±0.31 0.133±0.00 0.282±0.25
ENSG00000277440 ENST00000616838 0.067±0.00 0.907±0.00 N/A 0.083±0.01 0.145±0.04 0.137±0.12 0.246±0.14 0.661±0.00 0.059±0.00 0.251±0.17 0.222±0.00 0.261±0.12 N/A 0.249±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004069 ENSMUST00000060067 N/A N/A N/A N/A N/A N/A 7.464±0.76 N/A 4.933±0.66 N/A 10.449±1.10 5.844±0.14 8.724±0.00 N/A
ENSMUST00000115854 23.197±2.75 30.064±3.75 17.174±0.41 17.745±5.57 23.757±1.05 16.596±1.19 34.880±3.90 34.506±2.03 22.335±3.76 14.124±0.43 32.187±1.27 21.320±3.85 23.161±13.24 15.771±1.42
ENSMUST00000138495 N/A 42.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039637 ENSMUST00000038552 13.217±0.90 14.293±0.52 10.322±0.16 12.874±3.23 21.979±8.14 10.241±3.30 4.659±1.10 13.988±0.54 6.827±0.83 15.025±1.97 N/A 13.164±4.25 10.508±3.90 4.304±1.14
ENSMUST00000090480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150028 N/A N/A N/A 83.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039646 ENSMUST00000038770 17.972±2.36 15.041±1.50 16.663±1.22 4.489±0.00 27.634±10.07 10.541±0.20 8.997±1.15 16.416±2.34 6.632±2.00 40.223±5.85 N/A 36.948±12.52 10.912±4.11 7.516±0.34
ENSMUST00000138044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063445 ENSMUST00000074970 1.318±0.11 0.358±0.00 1.036±0.13 10.508±5.09 1.380±0.00 1.401±0.50 N/A 0.630±0.00 11.042±10.05 1.122±0.00 0.633±0.25 3.686±1.46 2.517±0.70 0.421±0.21
ENSMUST00000079130 2.035±0.80 0.653±0.32 1.636±0.70 7.534±5.82 1.885±0.64 0.756±0.09 0.627±0.06 0.872±0.37 6.550±7.67 N/A 0.796±0.32 2.169±0.93 2.134±1.04 0.214±0.09
ENSMUST00000115851 2.712±1.64 1.350±0.43 2.014±0.51 6.622±3.69 1.195±0.33 1.398±0.54 0.659±0.16 1.035±0.49 5.846±4.48 0.972±0.37 0.827±0.23 2.561±1.11 2.393±1.69 0.189±0.00
ENSMUST00000120056 0.872±0.14 0.530±0.18 0.298±0.00 1.716±0.00 0.767±0.52 0.594±0.24 0.393±0.19 1.529±0.26 0.732±0.16 1.008±0.14 0.129±0.00 2.976±0.95 0.035±0.00 0.145±0.08
ENSMUST00000124977 N/A N/A N/A N/A N/A 0.628±0.00 N/A N/A N/A 0.983±0.00 0.183±0.00 2.493±0.80 N/A 0.242±0.00
ENSMUST00000125140 N/A 0.940±0.34 N/A N/A 1.050±0.00 0.843±0.00 0.466±0.00 N/A 1.584±0.00 N/A N/A 1.679±0.00 N/A 0.240±0.00

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