C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 146
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000064280 Ccdc146 10090 - 5:21292961-21424677 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030552 Ccdc146-002 21317832-21424677 protein_coding
  ENSMUST00000115245 Ccdc146-001 21292961-21424677 protein_coding
  ENSMUST00000123796 Ccdc146-004 21318109-21330906 retained_intron
  ENSMUST00000129172 Ccdc146-003 21319023-21322746 retained_intron
  ENSMUST00000132473 Ccdc146-005 21322800-21331119 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030552ENSMUST00000115245ENSMUST00000123796ENSMUST00000129172ENSMUST00000132473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030552 0.160±0.00 N/A 0.064±0.01 0.229±0.00 0.142±0.00 N/A 0.260±0.00 N/A 0.033±0.02 N/A 0.968±0.16 1.492±0.80 0.033±0.02 11.669±3.36
ENSMUST00000115245 0.153±0.00 N/A 0.015±0.00 0.207±0.09 0.065±0.03 0.045±0.02 0.065±0.00 0.036±0.02 0.054±0.05 0.955±0.38 N/A 2.123±0.96 0.038±0.02 14.559±10.45
ENSMUST00000123796 0.308±0.19 N/A 0.043±0.00 N/A 0.160±0.01 0.181±0.07 0.324±0.05 N/A 0.013±0.00 N/A 1.512±0.29 N/A 0.079±0.00 32.052±0.00
ENSMUST00000129172 N/A N/A N/A N/A 0.140±0.00 N/A 0.165±0.00 N/A 0.035±0.01 N/A N/A N/A 0.050±0.00 N/A
ENSMUST00000132473 N/A 0.339±0.13 N/A N/A 0.127±0.03 0.545±0.00 0.856±0.01 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_00052K CIL_00052K_0003 CGP 5:21292961-21424677

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004794 ccdc146 coiled-coil domain containing 146 protein_coding Danio_rerio
ENSG00000135205 CCDC146 coiled-coil domain containing 146 protein_coding Homo_sapiens

Loading