C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 146
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115245 Ccdc146-001 ENSMUSG00000064280 10090 - 5:21292961-21424677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000115245
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000115245 0.153±0.00 0.015±0.00 0.207±0.09 0.065±0.03 0.045±0.02 0.065±0.00 0.036±0.02 0.054±0.05 0.955±0.38 2.123±0.96 0.038±0.02 14.559±10.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_00052K CIL_00052K_0003 CGP 5:21292961-21424677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285871 CCDC146-001 protein_coding Homo_sapiens 0 2104
ENST00000415740 CCDC146-003 processed_transcript Homo_sapiens 0 1358
ENST00000415750 CCDC146-006 protein_coding Homo_sapiens 0 267
ENST00000461259 CCDC146-004 retained_intron Homo_sapiens 0 893
ENST00000474733 CCDC146-011 retained_intron Homo_sapiens 0 396
ENST00000478101 CCDC146-012 retained_intron Homo_sapiens 0 603

Loading