C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA C330021F23 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000065952 C330021F23Rik 10090 + 8:3567990-3584939 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086479 C330021F23Rik-201 3580469-3584939 protein_coding
  ENSMUST00000136592 C330021F23Rik-001 3567998-3584776 protein_coding
  ENSMUST00000138454 C330021F23Rik-004 3567990-3573650 retained_intron
  ENSMUST00000151633 C330021F23Rik-002 3579730-3584939 protein_coding
  ENSMUST00000153341 C330021F23Rik-003 3567995-3578597 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086479ENSMUST00000136592ENSMUST00000138454ENSMUST00000151633ENSMUST00000153341
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086479 0.030±0.00 0.132±0.00 0.032±0.01 0.063±0.00 0.156±0.09 0.125±0.04 0.050±0.00 N/A N/A N/A 0.060±0.00 0.156±0.07 N/A 0.076±0.03
ENSMUST00000136592 0.089±0.04 N/A 0.050±0.00 0.122±0.04 N/A 0.275±0.19 0.060±0.01 1.164±0.40 0.954±0.38 0.116±0.05 N/A 0.167±0.07 0.674±0.46 0.061±0.00
ENSMUST00000138454 0.389±0.20 0.411±0.00 0.096±0.00 0.178±0.01 0.092±0.02 1.363±0.20 0.083±0.03 0.972±0.00 1.821±0.62 0.236±0.04 N/A 0.525±0.27 1.722±0.72 0.061±0.00
ENSMUST00000151633 N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 0.170±0.09 N/A
ENSMUST00000153341 0.384±0.20 0.110±0.04 N/A 0.058±0.00 N/A 0.440±0.00 N/A 1.244±0.29 1.605±0.92 0.122±0.04 N/A 0.277±0.19 0.505±0.30 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001933 IDA negative regulation of protein phosphorylation
GO:0008179 IDA adenylate cyclase binding
GO:0010739 IDA positive regulation of protein kinase A signaling
GO:0031224 IDA intrinsic component of membrane
GO:0050435 IDA beta-amyloid metabolic process
GO:1902430 IDA negative regulation of beta-amyloid formation

Homologs

No Homologs available.

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