C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA C330021F23 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086479 C330021F23Rik-201 ENSMUSG00000065952 10090 + 8:3580469-3584939 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartMuscleOvaryTestisENSMUST00000086479
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Muscle Ovary Testis
ENSMUST00000086479 0.030±0.00 0.132±0.00 0.032±0.01 0.063±0.00 0.156±0.09 0.125±0.04 0.050±0.00 0.060±0.00 0.156±0.07 0.076±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001933 IDA negative regulation of protein phosphorylation
GO:0008179 IDA adenylate cyclase binding
GO:0010739 IDA positive regulation of protein kinase A signaling
GO:0031224 IDA intrinsic component of membrane
GO:0050435 IDA beta-amyloid metabolic process
GO:1902430 IDA negative regulation of beta-amyloid formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296674 RPS23-001 protein_coding Homo_sapiens 0 516
ENST00000429775 RPS23P8-001 processed_pseudogene Homo_sapiens 0 353
ENST00000466210 RPS23P7-001 processed_pseudogene Homo_sapiens 0 359
ENST00000503605 RPS23-003 processed_transcript Homo_sapiens 0 475
ENST00000504293 RPS23-004 retained_intron Homo_sapiens 0 486
ENST00000507980 RPS23-006 protein_coding Homo_sapiens 9.99967e-42 174
ENST00000508814 ATG10-010 processed_transcript Homo_sapiens 4.99983e-42 174
ENST00000510210 RPS23-008 protein_coding Homo_sapiens 0 472
ENST00000512493 RPS23-007 protein_coding Homo_sapiens 0 473
ENST00000514253 ATG10-009 processed_transcript Homo_sapiens 3.00018e-42 176

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