C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pleckstrin homology domain containing, family D (with coiled-coil domains) member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000066438 Plekhd1 10090 + 12:80692591-80724214 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000140770 Plekhd1-001 80692591-80724214 protein_coding
  ENSMUST00000142760 Plekhd1-004 80720757-80722007 nonsense_mediated_decay
  ENSMUST00000152465 Plekhd1-003 80706846-80720684 processed_transcript
  ENSMUST00000153762 Plekhd1-002 80721732-80722910 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140770ENSMUST00000142760ENSMUST00000152465ENSMUST00000153762
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140770 0.135±0.12 0.030±0.00 2.656±0.13 1.157±0.47 0.278±0.10 1.590±0.75 0.094±0.01 1.505±0.38 0.415±0.75 9.745±2.32 0.137±0.07 9.477±4.21 7.898±3.86 1.684±0.39
ENSMUST00000142760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.14 N/A N/A N/A
ENSMUST00000152465 N/A N/A N/A 10.299±0.00 N/A N/A N/A N/A N/A N/A 0.252±0.10 81.573±0.00 60.926±25.61 15.879±0.00
ENSMUST00000153762 0.050±0.00 0.068±0.02 N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K0 CIL_0001K0_0003 CGP 12:80644215-80724214
CIL_0006J0 CIL_0006J0_0003 CGP 12:80692591-80760541

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091349 plekhd1 pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 protein_coding Danio_rerio
ENSG00000175985 PLEKHD1 pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 protein_coding Homo_sapiens

Loading